tabula_muris_Limb_muscle_10x / accuracies.json
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{
"query_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| mesenchymal stem cell | 1317 | 1.00 | 1.00 | 1.00 | 1.00 | 0.00 | 0.99 | 1.00 | 1.00 | 1.00 |\n| endothelial cell | 682 | 1.00 | 0.99 | 0.99 | 0.99 | 0.00 | 0.99 | 1.00 | 0.99 | 1.00 |\n| macrophage | 255 | 0.99 | 0.99 | 1.00 | 0.99 | 0.00 | 0.99 | 1.00 | 1.00 | 0.99 |\n| skeletal muscle satellite cell | 178 | 1.00 | 0.99 | 0.99 | 0.99 | 0.00 | 0.99 | 0.99 | 0.99 | 1.00 |\n| B cell | 167 | 1.00 | 1.00 | 1.00 | 1.00 | 0.00 | 1.00 | 1.00 | 0.99 | 1.00 |\n| T cell | 111 | 0.99 | 0.99 | 0.99 | 1.00 | 0.00 | 1.00 | 1.00 | 0.99 | 1.00 |\n| smooth muscle cell | 141 | 0.99 | 0.99 | 0.99 | 0.98 | 0.00 | 0.95 | 0.99 | 0.98 | 0.99 |\n| Schwann cell | 19 | 0.95 | 0.95 | 0.95 | 0.97 | 0.00 | 0.90 | 0.95 | 0.95 | 0.95 |\n| cell of skeletal muscle | 17 | 0.97 | 1.00 | 1.00 | 1.00 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 |",
"ref_accuracy": "| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |\n| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |\n| mesenchymal stem cell | 11720 | 1.00 | 1.00 | 1.00 | 1.00 | 0.00 | 0.99 | 1.00 | 1.00 | 1.00 |\n| endothelial cell | 6212 | 1.00 | 0.99 | 1.00 | 1.00 | 0.00 | 0.99 | 1.00 | 0.99 | 1.00 |\n| macrophage | 2230 | 0.99 | 0.99 | 0.99 | 1.00 | 0.00 | 0.98 | 1.00 | 0.99 | 1.00 |\n| skeletal muscle satellite cell | 1877 | 0.99 | 0.99 | 1.00 | 1.00 | 0.00 | 1.00 | 1.00 | 0.99 | 1.00 |\n| B cell | 1344 | 0.99 | 1.00 | 0.99 | 1.00 | 0.00 | 0.99 | 0.99 | 0.99 | 1.00 |\n| T cell | 1143 | 0.99 | 1.00 | 1.00 | 0.99 | 0.00 | 0.99 | 1.00 | 1.00 | 1.00 |\n| smooth muscle cell | 1024 | 0.98 | 0.99 | 0.99 | 0.99 | 0.00 | 0.96 | 0.98 | 0.97 | 0.99 |\n| Schwann cell | 255 | 0.95 | 0.96 | 0.96 | 0.98 | 0.00 | 0.94 | 0.98 | 0.99 | 0.98 |\n| cell of skeletal muscle | 175 | 0.99 | 1.00 | 1.00 | 0.99 | 0.00 | 0.98 | 1.00 | 1.00 | 1.00 |"
}