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appp.py
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1 |
+
import streamlit as st
|
2 |
+
from PIL import Image
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3 |
+
import os
|
4 |
+
import base64
|
5 |
+
import io
|
6 |
+
from dotenv import load_dotenv
|
7 |
+
from groq import Groq
|
8 |
+
from reportlab.lib.pagesizes import letter
|
9 |
+
from reportlab.platypus import SimpleDocTemplate, Paragraph, Spacer, Image as ReportLabImage
|
10 |
+
from reportlab.lib.styles import getSampleStyleSheet, ParagraphStyle
|
11 |
+
from reportlab.lib.units import inch
|
12 |
+
from datetime import datetime
|
13 |
+
import re
|
14 |
+
from reportlab.lib import colors
|
15 |
+
import random
|
16 |
+
import streamlit.components.v1 as components
|
17 |
+
from openai import OpenAI
|
18 |
+
|
19 |
+
# ======================
|
20 |
+
# CONFIGURATION SETTINGS
|
21 |
+
# ======================
|
22 |
+
PAGE_CONFIG = {
|
23 |
+
"page_title": "Radiology Analyzer",
|
24 |
+
"page_icon": "🩺",
|
25 |
+
"layout": "wide",
|
26 |
+
"initial_sidebar_state": "expanded"
|
27 |
+
}
|
28 |
+
|
29 |
+
ALLOWED_FILE_TYPES = ['png', 'jpg', 'jpeg']
|
30 |
+
|
31 |
+
CSS_STYLES = """
|
32 |
+
<style>
|
33 |
+
/* Main background and text colors */
|
34 |
+
.main {
|
35 |
+
background-color: #0e1117;
|
36 |
+
color: #ffffff;
|
37 |
+
}
|
38 |
+
.sidebar .sidebar-content {
|
39 |
+
background-color: #1a1d24;
|
40 |
+
color: #ffffff;
|
41 |
+
}
|
42 |
+
|
43 |
+
/* Custom title styling */
|
44 |
+
.main-title {
|
45 |
+
font-size: 2.8rem;
|
46 |
+
font-weight: 700;
|
47 |
+
color: #ffffff;
|
48 |
+
margin-bottom: 0.2rem;
|
49 |
+
text-align: center;
|
50 |
+
}
|
51 |
+
.sub-title {
|
52 |
+
font-size: 1.5rem;
|
53 |
+
color: #9ca3af;
|
54 |
+
margin-top: 0.2rem;
|
55 |
+
text-align: center;
|
56 |
+
margin-bottom: 2rem;
|
57 |
+
}
|
58 |
+
|
59 |
+
/* Button styling */
|
60 |
+
.stButton>button {
|
61 |
+
background-color: #21b9e1 !important;
|
62 |
+
color: white !important;
|
63 |
+
border-radius: 8px !important;
|
64 |
+
padding: 0.5rem 1rem !important;
|
65 |
+
border: none !important;
|
66 |
+
transition: all 0.3s ease !important;
|
67 |
+
}
|
68 |
+
.stButton>button:hover {
|
69 |
+
background-color: #17a2b8 !important;
|
70 |
+
transform: translateY(-2px);
|
71 |
+
box-shadow: 0 4px 12px rgba(0, 200, 225, 0.3);
|
72 |
+
}
|
73 |
+
|
74 |
+
/* Report container */
|
75 |
+
.report-container {
|
76 |
+
background-color: #1a1d24;
|
77 |
+
border-radius: 10px;
|
78 |
+
padding: 25px;
|
79 |
+
margin-top: 20px;
|
80 |
+
box-shadow: 0 4px 15px rgba(0, 0, 0, 0.3);
|
81 |
+
border-left: 5px solid #21b9e1;
|
82 |
+
}
|
83 |
+
.report-text {
|
84 |
+
font-family: 'Inter', sans-serif;
|
85 |
+
font-size: 14px;
|
86 |
+
line-height: 1.6;
|
87 |
+
color: #e2e8f0;
|
88 |
+
}
|
89 |
+
|
90 |
+
/* File uploader */
|
91 |
+
.uploadedFile {
|
92 |
+
background-color: #1a1d24 !important;
|
93 |
+
border-radius: 10px !important;
|
94 |
+
padding: 10px !important;
|
95 |
+
border: 2px dashed #21b9e1 !important;
|
96 |
+
}
|
97 |
+
|
98 |
+
/* Sidebar items */
|
99 |
+
.sidebar-item {
|
100 |
+
padding: 10px 0;
|
101 |
+
border-bottom: 1px solid #2d3748;
|
102 |
+
}
|
103 |
+
.sidebar-title {
|
104 |
+
font-weight: bold;
|
105 |
+
color: #21b9e1;
|
106 |
+
margin-bottom: 10px;
|
107 |
+
}
|
108 |
+
|
109 |
+
/* Logo container */
|
110 |
+
.logo-container {
|
111 |
+
display: flex;
|
112 |
+
justify-content: center;
|
113 |
+
margin-bottom: 20px;
|
114 |
+
}
|
115 |
+
.logo-pulse {
|
116 |
+
width: 100px;
|
117 |
+
height: 100px;
|
118 |
+
border-radius: 50%;
|
119 |
+
animation: pulse 2s infinite;
|
120 |
+
display: flex;
|
121 |
+
justify-content: center;
|
122 |
+
align-items: center;
|
123 |
+
background-color: rgba(33, 185, 225, 0.1);
|
124 |
+
}
|
125 |
+
@keyframes pulse {
|
126 |
+
0% {
|
127 |
+
box-shadow: 0 0 0 0 rgba(33, 185, 225, 0.4);
|
128 |
+
}
|
129 |
+
70% {
|
130 |
+
box-shadow: 0 0 0 20px rgba(33, 185, 225, 0);
|
131 |
+
}
|
132 |
+
100% {
|
133 |
+
box-shadow: 0 0 0 0 rgba(33, 185, 225, 0);
|
134 |
+
}
|
135 |
+
}
|
136 |
+
|
137 |
+
/* Progress bar */
|
138 |
+
.stProgress > div > div {
|
139 |
+
background-color: #21b9e1 !important;
|
140 |
+
}
|
141 |
+
|
142 |
+
/* Analysis status indicator */
|
143 |
+
.analysis-complete {
|
144 |
+
display: inline-flex;
|
145 |
+
align-items: center;
|
146 |
+
background-color: rgba(33, 225, 185, 0.2);
|
147 |
+
color: #21e1b9;
|
148 |
+
padding: 8px 16px;
|
149 |
+
border-radius: 20px;
|
150 |
+
font-weight: 600;
|
151 |
+
margin-bottom: 20px;
|
152 |
+
}
|
153 |
+
.analysis-complete svg {
|
154 |
+
margin-right: 8px;
|
155 |
+
}
|
156 |
+
|
157 |
+
/* Drop zone */
|
158 |
+
.drop-zone {
|
159 |
+
background-color: #1a1d24;
|
160 |
+
border: 2px dashed #21b9e1;
|
161 |
+
border-radius: 10px;
|
162 |
+
padding: 40px 20px;
|
163 |
+
text-align: center;
|
164 |
+
transition: all 0.3s ease;
|
165 |
+
margin-bottom: 20px;
|
166 |
+
}
|
167 |
+
.drop-zone:hover {
|
168 |
+
border-color: #17a2b8;
|
169 |
+
background-color: #242830;
|
170 |
+
}
|
171 |
+
.drop-icon {
|
172 |
+
font-size: 3rem;
|
173 |
+
color: #21b9e1;
|
174 |
+
margin-bottom: 10px;
|
175 |
+
}
|
176 |
+
|
177 |
+
/* Markdown adjustments */
|
178 |
+
.markdown-text-container p {
|
179 |
+
color: #e2e8f0 !important;
|
180 |
+
}
|
181 |
+
|
182 |
+
/* Image styling */
|
183 |
+
.stImage img {
|
184 |
+
border-radius: 10px;
|
185 |
+
box-shadow: 0 4px 15px rgba(0, 0, 0, 0.3);
|
186 |
+
border: 3px solid #1a1d24;
|
187 |
+
}
|
188 |
+
|
189 |
+
/* Card styles */
|
190 |
+
.card {
|
191 |
+
background-color: #1a1d24;
|
192 |
+
border-radius: 10px;
|
193 |
+
padding: 20px;
|
194 |
+
margin-bottom: 20px;
|
195 |
+
box-shadow: 0 4px 15px rgba(0, 0, 0, 0.2);
|
196 |
+
transition: all 0.3s ease;
|
197 |
+
}
|
198 |
+
.card:hover {
|
199 |
+
transform: translateY(-5px);
|
200 |
+
box-shadow: 0 10px 25px rgba(0, 0, 0, 0.3);
|
201 |
+
}
|
202 |
+
.card-title {
|
203 |
+
color: #21b9e1;
|
204 |
+
font-size: 1.2rem;
|
205 |
+
font-weight: 600;
|
206 |
+
margin-bottom: 10px;
|
207 |
+
}
|
208 |
+
|
209 |
+
/* Tooltip */
|
210 |
+
.tooltip {
|
211 |
+
position: relative;
|
212 |
+
display: inline-block;
|
213 |
+
cursor: pointer;
|
214 |
+
}
|
215 |
+
.tooltip .tooltiptext {
|
216 |
+
visibility: hidden;
|
217 |
+
width: 200px;
|
218 |
+
background-color: #2d3748;
|
219 |
+
color: #fff;
|
220 |
+
text-align: center;
|
221 |
+
border-radius: 6px;
|
222 |
+
padding: 10px;
|
223 |
+
position: absolute;
|
224 |
+
z-index: 1;
|
225 |
+
bottom: 125%;
|
226 |
+
left: 50%;
|
227 |
+
margin-left: -100px;
|
228 |
+
opacity: 0;
|
229 |
+
transition: opacity 0.3s;
|
230 |
+
}
|
231 |
+
.tooltip:hover .tooltiptext {
|
232 |
+
visibility: visible;
|
233 |
+
opacity: 1;
|
234 |
+
}
|
235 |
+
|
236 |
+
/* API selector styling */
|
237 |
+
.api-selector {
|
238 |
+
background-color: #1a1d24;
|
239 |
+
border-radius: 10px;
|
240 |
+
padding: 15px;
|
241 |
+
margin-bottom: 20px;
|
242 |
+
border-left: 3px solid #21b9e1;
|
243 |
+
}
|
244 |
+
.api-selector-title {
|
245 |
+
color: #21b9e1;
|
246 |
+
font-weight: bold;
|
247 |
+
margin-bottom: 10px;
|
248 |
+
}
|
249 |
+
</style>
|
250 |
+
"""
|
251 |
+
|
252 |
+
# ======================
|
253 |
+
# CORE FUNCTIONS
|
254 |
+
# ======================
|
255 |
+
def configure_application():
|
256 |
+
"""Initialize application settings and styling"""
|
257 |
+
st.set_page_config(**PAGE_CONFIG)
|
258 |
+
st.markdown(CSS_STYLES, unsafe_allow_html=True)
|
259 |
+
|
260 |
+
def initialize_groq_client():
|
261 |
+
"""Create and validate Groq API client"""
|
262 |
+
load_dotenv()
|
263 |
+
api_key = os.getenv("GROQ_API_KEY")
|
264 |
+
if not api_key:
|
265 |
+
api_key = "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" # Fallback key
|
266 |
+
|
267 |
+
if not api_key:
|
268 |
+
st.error("Groq API key not found. Please provide an API key.")
|
269 |
+
return None
|
270 |
+
|
271 |
+
return Groq(api_key=api_key)
|
272 |
+
|
273 |
+
def initialize_openai_client():
|
274 |
+
"""Create and validate OpenAI API client"""
|
275 |
+
load_dotenv()
|
276 |
+
api_key = os.getenv("OPENAI_API_KEY")
|
277 |
+
|
278 |
+
# Check if API key is in session state (from user input)
|
279 |
+
if 'openai_api_key' in st.session_state and st.session_state.openai_api_key:
|
280 |
+
api_key = st.session_state.openai_api_key
|
281 |
+
|
282 |
+
if not api_key:
|
283 |
+
# Return None if no API key - we'll handle this in the UI
|
284 |
+
return None
|
285 |
+
|
286 |
+
return OpenAI(api_key=api_key)
|
287 |
+
|
288 |
+
def encode_logo(image_path):
|
289 |
+
"""Encode logo image to base64"""
|
290 |
+
try:
|
291 |
+
with open(image_path, "rb") as img_file:
|
292 |
+
return base64.b64encode(img_file.read()).decode("utf-8")
|
293 |
+
except FileNotFoundError:
|
294 |
+
# Return a placeholder image (blue medical technology icon) encoded as base64
|
295 |
+
return "iVBORw0KGgoAAAANSUhEUgAAAGQAAABkCAYAAABw4pVUAAAACXBIWXMAAAsTAAALEwEAmpwYAAAFLUlEQVR4nO2cfYhUVRTGf+uqlWmpZX6kaZpppX1YWpllEQVFEQVBEVFUpBVF0QdFRlEUVERBRNAfkRVZ9GVFpaXlRwpqlGlqpmZqaZa67q7r6qrr9kf30dxh9u7MnTvz5t6Z+8DLMDvv3nPOuWfOPe++e+6CEEIIIYQQ1cCVwBpgl8/2AnCa7UBjZDjwIbDXR4FUsjbg99zV7AZGpBJoZlwDfK+EeOAHYJTNIPuVkMAca2PghBs/AEcZMpdKSGD20IKJQCuvQSoYLSWjpJRiYzLCHgCeB5YDzTZicYGrgF+V7T10AG+kGcRLwPGWYnGFicA/SmgfeoAZaQ6yFhjmMxzXGAV8q6T24WdggB/DTcDFluJxhYHAFiW1DyuDGG9OIIyrgJ+U2N+4z69xNzxcXZ1L3FdDqoVoXucjgdXkQSz6nKzw5BkFbK/xAV3jUsBpoUEJKYmNQD0Pnw+xtgRCeNdg6WO7wvVuVEkMtiWE8K5SrZ1L+pwPAusV+n7Zk8ZHv35FaWiUEOPcC3xRo8JbV41i+3K8RgVX8aysMbGVnWHVKLYvR2tEcE9Wq9iaiMYaEdzjNSq2JqK+RgR3by2KrQYmdG0MCu6yahdbja16wDe1KLYaW/XA6BoUWxPRWWWCuxw4XKNiq5NVD1QjP/oVW5PCrFbmVrW27Krpz8AVZZrWrBaRvQcsAb4CfitKbEtpgbWxAzg3zKSSEyLBjXIVtzf3vLZYqaUQhRQGRWoTmCcHjvDpX41UKcVGZLqPQPdoYkqTxQEW+DTWC7yfVBDWspmQkFHmlWXMfkwRInoMeKyAn+F6Zw2E4e1c9F7KPsMxdxdwfJQVNTfwU9U7bGBfcYLXmlKp5xUL4WUt/Jvgxp5QUaMd3MbA58XMRlqgBxiYVAw3Ay8m8PFNQC+EQVWXlD8XVVIQVwCtZQgiHwaYMpwwiFuThpn+ZFFBzA7gIzCVnLRNAjodF87GIhdPDzArJmxsJxxicYZvFrnwfUBnwrDG5ApjH5cQHnVFhYsB1gEdMWGjtwwXeZnWZJ1fZtjtucHSUuSY/WWGpXLREcWQeBjYFHGRzeUI4nKgiPWAKbmw0NJC2Hhc6Fx6G3SLe76Wc7s17j7BTOA94IKIY7g8I+PrDfZvZWX/gojj/QtMB74vOcwW/qPQnUZ23FHGZNlX5KLFQgMjciOH+W9nngG25MQwLpXvxcDCnO97YubXDGqLEUZTbsvKA8BDwNWGPvuNsTKKKXEzdKNwbg6mxMnlGcZ7iu1BYOmJy4U1phZpgEJhw4tEGZq8DQR2W57QdUPnTIrA1nZaGLEdJLt3p/uD2aCHo+5GFKt4zYWnxs2Qgej1cVZrJJIcYnoX+MiXdW/ywOYtztEp+Jhjd//5YMaGJ5iHrq0GVtB7X5ZY88p2gTBIlRDjiQ3AAVH2K0oIZTG5hP7ESCWkTzUoFJ3AEVlHYotJWQx0TYwNSoj5w2chKP3DibadnWk7SMepVkKMJ9qBWPocB2QdgG1eL0r7gQxwmBJSXvOeRJaXUcY/sMWExm4lxHhiPtBWRuhryjXeRQkJ1MWfVsb2HVZfpjrFbZ1aAMzJNaMLn3+35LbXwXJZR0IIIYQQQgghhBBCCCGEEEIIIYQQQgghhBBCCCGEEEIIIYQQQgghhBBCCCGEEEIIIYQQQgghhBBCCCGEEEIIIYQQQgghhBBCCCGEEEIIIYQQQgghhBBCCCGEEEIIIYQQQgghhBBCCCGEEEIIIYRD/A9AH1PHpL17/AAAAABJRU5ErkJggg=="
|
296 |
+
|
297 |
+
def process_image_data(uploaded_file):
|
298 |
+
"""Convert image to base64 encoded string"""
|
299 |
+
try:
|
300 |
+
image = Image.open(uploaded_file)
|
301 |
+
buffer = io.BytesIO()
|
302 |
+
image.save(buffer, format=image.format)
|
303 |
+
return base64.b64encode(buffer.getvalue()).decode('utf-8'), image.format
|
304 |
+
except Exception as e:
|
305 |
+
st.error(f"Image processing error: {str(e)}")
|
306 |
+
return None, None
|
307 |
+
|
308 |
+
def generate_pdf_report(report_text, uploaded_file):
|
309 |
+
"""Generate professionally formatted PDF report with bold headers."""
|
310 |
+
buffer = io.BytesIO()
|
311 |
+
doc = SimpleDocTemplate(buffer, pagesize=letter,
|
312 |
+
rightMargin=72, leftMargin=72,
|
313 |
+
topMargin=72, bottomMargin=72)
|
314 |
+
|
315 |
+
# Create custom styles for different parts of the report
|
316 |
+
styles = getSampleStyleSheet()
|
317 |
+
|
318 |
+
# Custom styles for better formatting
|
319 |
+
title_style = ParagraphStyle(
|
320 |
+
'ReportTitle',
|
321 |
+
parent=styles['Title'],
|
322 |
+
fontSize=16,
|
323 |
+
alignment=1, # Center aligned
|
324 |
+
spaceAfter=12
|
325 |
+
)
|
326 |
+
|
327 |
+
header_style = ParagraphStyle(
|
328 |
+
'SectionHeader',
|
329 |
+
parent=styles['Heading2'],
|
330 |
+
fontSize=12,
|
331 |
+
fontName='Helvetica-Bold',
|
332 |
+
textColor=colors.black,
|
333 |
+
spaceBefore=12,
|
334 |
+
spaceAfter=6
|
335 |
+
)
|
336 |
+
|
337 |
+
normal_style = ParagraphStyle(
|
338 |
+
'NormalText',
|
339 |
+
parent=styles['BodyText'],
|
340 |
+
fontSize=11,
|
341 |
+
leading=14,
|
342 |
+
spaceAfter=8
|
343 |
+
)
|
344 |
+
|
345 |
+
abnormal_style = ParagraphStyle(
|
346 |
+
'AbnormalText',
|
347 |
+
parent=styles['BodyText'],
|
348 |
+
fontSize=11,
|
349 |
+
leading=14,
|
350 |
+
textColor=colors.red,
|
351 |
+
backColor=colors.lightgrey,
|
352 |
+
borderPadding=5,
|
353 |
+
spaceAfter=8
|
354 |
+
)
|
355 |
+
|
356 |
+
footer_style = ParagraphStyle(
|
357 |
+
'FooterText',
|
358 |
+
parent=styles['Italic'],
|
359 |
+
fontSize=9,
|
360 |
+
alignment=1 # Center aligned
|
361 |
+
)
|
362 |
+
|
363 |
+
# Begin building the report
|
364 |
+
story = []
|
365 |
+
|
366 |
+
# Hospital/Institution Header
|
367 |
+
header_text = "RADIOLOGY DEPARTMENT"
|
368 |
+
header = Paragraph(header_text, title_style)
|
369 |
+
story.append(header)
|
370 |
+
|
371 |
+
# Report Title
|
372 |
+
report_title = "RADIOLOGICAL EXAMINATION REPORT"
|
373 |
+
title = Paragraph(report_title, title_style)
|
374 |
+
story.append(title)
|
375 |
+
|
376 |
+
# Add date and report ID
|
377 |
+
date_text = f"Date: {datetime.now().strftime('%B %d, %Y')}"
|
378 |
+
report_id = f"Report ID: RAD-{datetime.now().strftime('%Y%m%d')}-{random.randint(1000, 9999)}"
|
379 |
+
date_para = Paragraph(date_text, normal_style)
|
380 |
+
id_para = Paragraph(report_id, normal_style)
|
381 |
+
story.append(date_para)
|
382 |
+
story.append(id_para)
|
383 |
+
story.append(Spacer(1, 12))
|
384 |
+
|
385 |
+
# Add the image to the PDF
|
386 |
+
if uploaded_file:
|
387 |
+
try:
|
388 |
+
uploaded_file.seek(0) # Reset file pointer to beginning
|
389 |
+
pil_image = Image.open(uploaded_file)
|
390 |
+
img_width = 5 * inch
|
391 |
+
aspect = float(pil_image.height) / float(pil_image.width)
|
392 |
+
img_height = img_width * aspect
|
393 |
+
|
394 |
+
img_temp = io.BytesIO()
|
395 |
+
pil_image.save(img_temp, format=pil_image.format if pil_image.format else 'JPEG')
|
396 |
+
img_temp.seek(0)
|
397 |
+
|
398 |
+
img = ReportLabImage(img_temp, width=img_width, height=img_height)
|
399 |
+
story.append(img)
|
400 |
+
story.append(Spacer(1, 12))
|
401 |
+
|
402 |
+
# Add image caption
|
403 |
+
caption = Paragraph("Figure 1: Radiological Image for Analysis", normal_style)
|
404 |
+
story.append(caption)
|
405 |
+
story.append(Spacer(1, 12))
|
406 |
+
|
407 |
+
except Exception as e:
|
408 |
+
error_text = Paragraph(f"Image processing error: {str(e)}", normal_style)
|
409 |
+
story.append(error_text)
|
410 |
+
story.append(Spacer(1, 12))
|
411 |
+
|
412 |
+
# Clean the report text (remove markdown-style formatting and unwanted characters)
|
413 |
+
cleaned_text = report_text.replace('**', '').replace('##', '').replace('*', '-')
|
414 |
+
|
415 |
+
# Define section headers to identify
|
416 |
+
section_headers = [
|
417 |
+
"DIAGNOSIS",
|
418 |
+
"ETIOLOGY",
|
419 |
+
"RISK FACTORS",
|
420 |
+
"PATHOPHYSIOLOGY",
|
421 |
+
"CLINICAL FEATURES",
|
422 |
+
"SIGNS AND SYMPTOMS",
|
423 |
+
"INVESTIGATIONS",
|
424 |
+
"MANAGEMENT",
|
425 |
+
"INITIAL STABILIZATION",
|
426 |
+
"MEDICAL MANAGEMENT",
|
427 |
+
"SURGICAL MANAGEMENT",
|
428 |
+
"PROGNOSIS"
|
429 |
+
]
|
430 |
+
|
431 |
+
# Split into lines for more precise processing
|
432 |
+
lines = cleaned_text.split('\n')
|
433 |
+
current_section = ""
|
434 |
+
section_content = ""
|
435 |
+
|
436 |
+
for i, line in enumerate(lines):
|
437 |
+
line = line.strip()
|
438 |
+
if not line:
|
439 |
+
continue
|
440 |
+
|
441 |
+
# Remove any "Step X:" prefixes
|
442 |
+
line = re.sub(r'^Step \d+:\s*', '', line)
|
443 |
+
|
444 |
+
# Check if this is a section header
|
445 |
+
is_header = False
|
446 |
+
for header in section_headers:
|
447 |
+
if line.upper().startswith(header) or line.upper() == header + ":":
|
448 |
+
is_header = True
|
449 |
+
break
|
450 |
+
|
451 |
+
# Also check if it's a short line ending with a colon (likely a header)
|
452 |
+
if not is_header and len(line) < 60 and line.endswith(':'):
|
453 |
+
is_header = True
|
454 |
+
|
455 |
+
# If we found a header
|
456 |
+
if is_header:
|
457 |
+
# First add any accumulated content from previous section
|
458 |
+
if section_content.strip():
|
459 |
+
# Check for severe abnormalities to highlight
|
460 |
+
severe_abnormal_keywords = [
|
461 |
+
'severe', 'critical', 'urgent', 'emergency', 'life-threatening',
|
462 |
+
'malignant', 'neoplasm', 'carcinoma', 'metastasis', 'hemorrhage',
|
463 |
+
'fracture', 'rupture', 'perforation',
|
464 |
+
]
|
465 |
+
|
466 |
+
has_severe_issue = any(keyword in section_content.lower() for keyword in severe_abnormal_keywords)
|
467 |
+
|
468 |
+
if current_section.upper().startswith("DIAGNOSIS") or current_section.upper().startswith("ABNORMAL"):
|
469 |
+
# This is a diagnosis section - highlight abnormalities
|
470 |
+
p = Paragraph(section_content, abnormal_style if has_severe_issue else normal_style)
|
471 |
+
else:
|
472 |
+
p = Paragraph(section_content, normal_style)
|
473 |
+
|
474 |
+
story.append(p)
|
475 |
+
story.append(Spacer(1, 6))
|
476 |
+
section_content = ""
|
477 |
+
|
478 |
+
# Add the new section header - remove any trailing colon for cleaner look
|
479 |
+
clean_header = line.strip()
|
480 |
+
if clean_header.endswith(':'):
|
481 |
+
clean_header = clean_header[:-1]
|
482 |
+
|
483 |
+
current_section = clean_header
|
484 |
+
p = Paragraph(f"<b>{clean_header}</b>", header_style) # Bold the header
|
485 |
+
story.append(p)
|
486 |
+
|
487 |
+
else:
|
488 |
+
# This is content - append to the current section content
|
489 |
+
if section_content:
|
490 |
+
section_content += "<br/>" + line
|
491 |
+
else:
|
492 |
+
section_content = line
|
493 |
+
|
494 |
+
# Add any remaining content
|
495 |
+
if section_content.strip():
|
496 |
+
p = Paragraph(section_content, normal_style)
|
497 |
+
story.append(p)
|
498 |
+
|
499 |
+
# Add conclusion if not present
|
500 |
+
if not any("PROGNOSIS" in line.upper() for line in lines):
|
501 |
+
conclusion_header = Paragraph("<b>PROGNOSIS</b>", header_style)
|
502 |
+
story.append(conclusion_header)
|
503 |
+
story.append(Spacer(1, 6))
|
504 |
+
|
505 |
+
conclusion_text = "Prognosis varies based on the extent and location of findings. Clinical correlation with the patient's symptoms and medical history is recommended."
|
506 |
+
conclusion_para = Paragraph(conclusion_text, normal_style)
|
507 |
+
story.append(conclusion_para)
|
508 |
+
|
509 |
+
# Add footer with disclaimer
|
510 |
+
story.append(Spacer(1, 24))
|
511 |
+
disclaimer = "This report was generated with AI assistance and should be reviewed by a qualified healthcare professional."
|
512 |
+
footer = Paragraph(disclaimer, footer_style)
|
513 |
+
story.append(footer)
|
514 |
+
|
515 |
+
# Build PDF
|
516 |
+
doc.build(story)
|
517 |
+
buffer.seek(0)
|
518 |
+
return buffer
|
519 |
+
|
520 |
+
|
521 |
+
|
522 |
+
|
523 |
+
|
524 |
+
|
525 |
+
def generate_radiology_report_groq(uploaded_file, client):
|
526 |
+
"""Generate AI-powered radiology analysis using Groq API"""
|
527 |
+
base64_image, img_format = process_image_data(uploaded_file)
|
528 |
+
|
529 |
+
if not base64_image:
|
530 |
+
return None
|
531 |
+
|
532 |
+
image_url = f"data:image/{img_format.lower()};base64,{base64_image}"
|
533 |
+
|
534 |
+
try:
|
535 |
+
with st.spinner("Analyzing image with Groq..."):
|
536 |
+
# Add progress bar for visual feedback
|
537 |
+
progress_bar = st.progress(0)
|
538 |
+
for i in range(100):
|
539 |
+
# Update progress bar
|
540 |
+
progress_bar.progress(i + 1)
|
541 |
+
import time
|
542 |
+
time.sleep(0.025) # Simulate processing time
|
543 |
+
|
544 |
+
# Updated prompt to request the detailed, structured format
|
545 |
+
response = client.chat.completions.create(
|
546 |
+
model="llama-3.2-90b-vision-preview", # Use Groq's model
|
547 |
+
messages=[{
|
548 |
+
"role": "user",
|
549 |
+
"content": [
|
550 |
+
{"type": "text", "text": (
|
551 |
+
"""As a radiologist, analyze the following MRI report and provide a comprehensive report structured as follows:
|
552 |
+
|
553 |
+
1. **DIAGNOSIS**: Clearly state the primary diagnosis, including dimensions where applicable (e.g., if a tumor is present). Use specific anatomical terms relevant to the body part being examined.
|
554 |
+
|
555 |
+
2. **FINDINGS**:
|
556 |
+
- Provide detailed observations from the MRI report, including:
|
557 |
+
- The size, shape, and location of any lesions or abnormalities if applicable.
|
558 |
+
- Description of the surrounding tissues and structures if applicable.
|
559 |
+
- Any noted changes in signal intensity on various sequences (e.g., T1W, T2W, FLAIR) if applicable.
|
560 |
+
- Mention of any associated findings, such as edema, mass effect, or midline shift if applicble.
|
561 |
+
- Specific comments on vascular structures, if applicable.
|
562 |
+
|
563 |
+
3. **PATHOPHYSIOLOGY**: Briefly explain the disease mechanism related to the diagnosis, focusing on how it affects the specific body part.
|
564 |
+
|
565 |
+
4. **CLINICAL FEATURES**: Provide an overview of typical clinical presentations associated with this diagnosis, emphasizing symptoms that may arise from abnormalities in the specified anatomical area.
|
566 |
+
|
567 |
+
5. **SIGNS AND SYMPTOMS**: List common signs and symptoms relevant to the findings in the MRI report. Tailor this section to align with the specific anatomy being assessed.
|
568 |
+
|
569 |
+
6. **INVESTIGATIONS**: Mention diagnostic tests typically used for confirmation of the diagnosis, including imaging studies or laboratory tests pertinent to the body part.
|
570 |
+
|
571 |
+
7. **MANAGEMENT**: Outline the management plans in three parts:
|
572 |
+
- Initial Stabilization: Describe immediate steps for patient care.
|
573 |
+
- Medical Management: Outline pharmacological treatments and monitoring.
|
574 |
+
- Surgical Management (if applicable): Discuss any surgical interventions specific to the diagnosis and body part.
|
575 |
+
|
576 |
+
8. **PROGNOSIS**: Describe expected outcomes and factors that may affect prognosis based on the diagnosis. Include considerations specific to the anatomical region and associated complications.
|
577 |
+
|
578 |
+
Please ensure to focus on the following findings from the report:
|
579 |
+
- Mention specific abnormalities based on the region (e.g., "T2/FLAIR hyperintensities in the right fronto-parietal region" for brain MRI).
|
580 |
+
- Highlight any significant lesions or deviations from the norm.
|
581 |
+
- Include any other abnormal findings noted in the report that are relevant to the specific anatomy.
|
582 |
+
|
583 |
+
Format each section with appropriate headings and use bullet points for lists. Base your analysis on the provided MRI report details."""
|
584 |
+
)},
|
585 |
+
{"type": "image_url", "image_url": {"url": image_url}},
|
586 |
+
]
|
587 |
+
}],
|
588 |
+
temperature=0.1,
|
589 |
+
max_tokens=3000, # Increased token limit for more detailed response
|
590 |
+
top_p=0.3
|
591 |
+
)
|
592 |
+
return response.choices[0].message.content
|
593 |
+
except Exception as e:
|
594 |
+
st.error(f"Groq API error: {str(e)}")
|
595 |
+
return None
|
596 |
+
|
597 |
+
def generate_radiology_report_openai(uploaded_file, client):
|
598 |
+
"""Generate AI-powered radiology analysis using OpenAI API"""
|
599 |
+
base64_image, img_format = process_image_data(uploaded_file)
|
600 |
+
|
601 |
+
if not base64_image:
|
602 |
+
return None
|
603 |
+
|
604 |
+
try:
|
605 |
+
with st.spinner("Analyzing image with OpenAI..."):
|
606 |
+
# Add progress bar for visual feedback
|
607 |
+
progress_bar = st.progress(0)
|
608 |
+
for i in range(100):
|
609 |
+
# Update progress bar
|
610 |
+
progress_bar.progress(i + 1)
|
611 |
+
import time
|
612 |
+
time.sleep(0.025) # Simulate processing time
|
613 |
+
|
614 |
+
# Updated prompt to request the detailed, structured format
|
615 |
+
response = client.chat.completions.create(
|
616 |
+
model="gpt-4-vision-preview", # Use OpenAI's vision model
|
617 |
+
messages=[
|
618 |
+
{
|
619 |
+
"role": "user",
|
620 |
+
"content": [
|
621 |
+
{
|
622 |
+
"type": "text",
|
623 |
+
"text": (
|
624 |
+
"As a radiologist, analyze this medical image and provide a comprehensive report with the following structure:\n\n"
|
625 |
+
"1. DIAGNOSIS: Clear statement of primary diagnosis\n\n"
|
626 |
+
"2. ETIOLOGY: List possible causes of the identified condition\n\n"
|
627 |
+
"3. RISK FACTORS: Bullet-point list of risk factors associated with the condition\n\n"
|
628 |
+
"4. PATHOPHYSIOLOGY: Brief explanation of the disease mechanism\n\n"
|
629 |
+
"5. CLINICAL FEATURES: Overview of typical clinical presentation\n\n"
|
630 |
+
"6. SIGNS AND SYMPTOMS: Bullet-point list of common signs and symptoms\n\n"
|
631 |
+
"7. INVESTIGATIONS: Diagnostic tests typically used for confirmation\n\n"
|
632 |
+
"8. MANAGEMENT: Divided into three parts:\n"
|
633 |
+
" - Initial Stabilization\n"
|
634 |
+
" - Medical Management\n"
|
635 |
+
" - Surgical Management (if applicable)\n\n"
|
636 |
+
"9. PROGNOSIS: Expected outcomes and factors affecting prognosis\n\n"
|
637 |
+
"Format each section with appropriate headings and use bullet points for lists. If you identify abnormal findings, make sure to highlight these clearly."
|
638 |
+
)
|
639 |
+
},
|
640 |
+
{
|
641 |
+
"type": "image_url",
|
642 |
+
"image_url": {
|
643 |
+
"url": f"data:image/{img_format.lower()};base64,{base64_image}"
|
644 |
+
}
|
645 |
+
}
|
646 |
+
]
|
647 |
+
}
|
648 |
+
],
|
649 |
+
max_tokens=3000 # Increased token limit for more detailed response
|
650 |
+
)
|
651 |
+
return response.choices[0].message.content
|
652 |
+
except Exception as e:
|
653 |
+
st.error(f"OpenAI API error: {str(e)}")
|
654 |
+
return None
|
655 |
+
|
656 |
+
def generate_radiology_report(uploaded_file, api_choice='groq'):
|
657 |
+
"""Generate report using the selected API"""
|
658 |
+
if api_choice == 'groq':
|
659 |
+
client = initialize_groq_client()
|
660 |
+
if client:
|
661 |
+
return generate_radiology_report_groq(uploaded_file, client)
|
662 |
+
else:
|
663 |
+
st.error("Failed to initialize Groq client. Please check your API key.")
|
664 |
+
return None
|
665 |
+
else: # OpenAI
|
666 |
+
client = initialize_openai_client()
|
667 |
+
if client:
|
668 |
+
return generate_radiology_report_openai(uploaded_file, client)
|
669 |
+
else:
|
670 |
+
st.error("OpenAI API key is required. Please provide your API key.")
|
671 |
+
return None
|
672 |
+
|
673 |
+
# ======================
|
674 |
+
# UI COMPONENTS
|
675 |
+
# ======================
|
676 |
+
def display_animated_logo():
|
677 |
+
"""Display an animated medical logo"""
|
678 |
+
logo_b64 = encode_logo("MediSight\src\Round_image_depicting_a_futuristic_medical_image_a-1742282117033-photoaidcom-cropped.png")
|
679 |
+
|
680 |
+
# If logo file doesn't exist, use the placeholder from encode_logo
|
681 |
+
st.markdown(
|
682 |
+
f"""
|
683 |
+
<div class="logo-container">
|
684 |
+
<div class="logo-pulse">
|
685 |
+
<img src="data:image/png;base64,{logo_b64}" width="200">
|
686 |
+
</div>
|
687 |
+
</div>
|
688 |
+
""",
|
689 |
+
unsafe_allow_html=True
|
690 |
+
)
|
691 |
+
|
692 |
+
def display_main_interface():
|
693 |
+
"""Render primary application interface"""
|
694 |
+
# Display animated logo and titles
|
695 |
+
display_animated_logo()
|
696 |
+
|
697 |
+
st.markdown('<h1 class="main-title">Radiology Analyzer</h1>', unsafe_allow_html=True)
|
698 |
+
st.markdown('<p class="sub-title">Advanced Medical Imaging Analysis</p>', unsafe_allow_html=True)
|
699 |
+
|
700 |
+
# Action buttons
|
701 |
+
if st.session_state.get('analysis_result'):
|
702 |
+
st.markdown(
|
703 |
+
"""
|
704 |
+
<div class="analysis-complete">
|
705 |
+
<svg xmlns="http://www.w3.org/2000/svg" width="16" height="16" fill="currentColor" viewBox="0 0 16 16">
|
706 |
+
<path d="M16 8A8 8 0 1 1 0 8a8 8 0 0 1 16 0zm-3.97-3.03a.75.75 0 0 0-1.08.022L7.477 9.417 5.384 7.323a.75.75 0 0 0-1.06 1.06L6.97 11.03a.75.75 0 0 0 1.079-.02l3.992-4.99a.75.75 0 0 0-.01-1.05z"/>
|
707 |
+
</svg>
|
708 |
+
Analysis Complete
|
709 |
+
</div>
|
710 |
+
""",
|
711 |
+
unsafe_allow_html=True
|
712 |
+
)
|
713 |
+
|
714 |
+
col1, col2 = st.columns([1, 1])
|
715 |
+
with col1:
|
716 |
+
pdf_report = generate_pdf_report(st.session_state.analysis_result, st.session_state.uploaded_file)
|
717 |
+
st.download_button(
|
718 |
+
label="📄 Download PDF Report",
|
719 |
+
data=pdf_report,
|
720 |
+
file_name="radiology_report.pdf",
|
721 |
+
mime="application/pdf",
|
722 |
+
use_container_width=True,
|
723 |
+
help="Download formal PDF version of the report"
|
724 |
+
)
|
725 |
+
|
726 |
+
with col2:
|
727 |
+
if st.button("Clear Analysis 🗑️", use_container_width=True, help="Remove current results"):
|
728 |
+
st.session_state.pop('analysis_result', None)
|
729 |
+
st.session_state.pop('uploaded_file', None)
|
730 |
+
st.rerun()
|
731 |
+
|
732 |
+
# Display analysis results in a styled container
|
733 |
+
st.markdown("### 🎯 Radiological Findings Report")
|
734 |
+
st.markdown(
|
735 |
+
f'<div class="report-container"><div class="report-text">{st.session_state.analysis_result}</div></div>',
|
736 |
+
unsafe_allow_html=True
|
737 |
+
)
|
738 |
+
else:
|
739 |
+
# Show a centered placeholder message
|
740 |
+
st.markdown(
|
741 |
+
"""
|
742 |
+
<div style="text-align: center; margin-top: 50px; color: #9ca3af; padding: 100px 0;">
|
743 |
+
<svg xmlns="http://www.w3.org/2000/svg" width="64" height="64" fill="currentColor" viewBox="0 0 16 16" style="margin-bottom: 20px;">
|
744 |
+
<path d="M8 0a8 8 0 1 0 0 16A8 8 0 0 0 8 0ZM1.5 8a6.5 6.5 0 1 1 13 0 6.5 6.5 0 0 1-13 0Zm4.879-2.773 4.264 2.559a.25.25 0 0 1 0 .428l-4.264 2.559A.25.25 0 0 1 6 10.559V5.442a.25.25 0 0 1 .379-.215Z"/>
|
745 |
+
</svg>
|
746 |
+
<p style="font-size: 1.2rem;">Upload a medical image to begin analysis</p>
|
747 |
+
</div>
|
748 |
+
""",
|
749 |
+
unsafe_allow_html=True
|
750 |
+
)
|
751 |
+
|
752 |
+
def render_sidebar():
|
753 |
+
"""Create sidebar interface elements"""
|
754 |
+
with st.sidebar:
|
755 |
+
st.markdown('<div class="sidebar-item">', unsafe_allow_html=True)
|
756 |
+
st.markdown('<div class="sidebar-title">Diagnostic Capabilities</div>', unsafe_allow_html=True)
|
757 |
+
st.markdown("""
|
758 |
+
- **Multi-Modality Analysis:** X-ray, MRI, CT, Ultrasound
|
759 |
+
- **Pathology Detection:** Fractures, tumors, infections
|
760 |
+
- **Comparative Analysis:** Track disease progression
|
761 |
+
- **Structured Reporting:** Standardized output format
|
762 |
+
- **Clinical Correlation:** Suggested next steps
|
763 |
+
""")
|
764 |
+
st.markdown("""
|
765 |
+
<div class="tooltip">
|
766 |
+
<strong>Disclaimer:</strong> This service does not provide medical advice.
|
767 |
+
<span class="tooltiptext">Always consult with a qualified healthcare professional for diagnosis and treatment.</span>
|
768 |
+
</div>
|
769 |
+
""", unsafe_allow_html=True)
|
770 |
+
st.markdown('</div>', unsafe_allow_html=True)
|
771 |
+
|
772 |
+
# API Selection
|
773 |
+
st.markdown('<div class="sidebar-item">', unsafe_allow_html=True)
|
774 |
+
st.markdown('<div class="sidebar-title">API Configuration</div>', unsafe_allow_html=True)
|
775 |
+
|
776 |
+
# API provider selection
|
777 |
+
api_provider = st.radio(
|
778 |
+
"Select AI Provider",
|
779 |
+
options=["Groq"],
|
780 |
+
index=0, # Default to Groq
|
781 |
+
)
|
782 |
+
|
783 |
+
# If OpenAI is selected, show API key input
|
784 |
+
# if api_provider == "OpenAI":
|
785 |
+
# openai_key = st.text_input(
|
786 |
+
# "OpenAI API Key",
|
787 |
+
# type="password",
|
788 |
+
# help="Enter your OpenAI API key",
|
789 |
+
# value=st.session_state.get('openai_api_key', '')
|
790 |
+
# )
|
791 |
+
# if openai_key:
|
792 |
+
# st.session_state.openai_api_key = openai_key
|
793 |
+
|
794 |
+
st.markdown('</div>', unsafe_allow_html=True)
|
795 |
+
|
796 |
+
# Image Upload Section
|
797 |
+
st.markdown('<div class="sidebar-item">', unsafe_allow_html=True)
|
798 |
+
st.markdown('<div class="sidebar-title">Image Upload Section</div>', unsafe_allow_html=True)
|
799 |
+
|
800 |
+
# Create a styled drop zone
|
801 |
+
st.markdown(
|
802 |
+
"""
|
803 |
+
<div class="drop-zone">
|
804 |
+
<div class="drop-icon">📤</div>
|
805 |
+
<p>Drag and drop file here</p>
|
806 |
+
<p style="font-size: 0.8rem; color: #9ca3af;">or use the uploader below</p>
|
807 |
+
</div>
|
808 |
+
""",
|
809 |
+
unsafe_allow_html=True
|
810 |
+
)
|
811 |
+
|
812 |
+
uploaded_file = st.file_uploader(
|
813 |
+
"Select Medical Image",
|
814 |
+
type=ALLOWED_FILE_TYPES,
|
815 |
+
label_visibility="collapsed",
|
816 |
+
help="Supported formats: PNG, JPG, JPEG"
|
817 |
+
)
|
818 |
+
|
819 |
+
if uploaded_file:
|
820 |
+
st.session_state.uploaded_file = uploaded_file # Store uploaded file in session state
|
821 |
+
|
822 |
+
# Display image with a styled container
|
823 |
+
st.markdown('<div class="card">', unsafe_allow_html=True)
|
824 |
+
st.image(Image.open(uploaded_file),
|
825 |
+
caption="Uploaded Medical Image",
|
826 |
+
use_container_width=True)
|
827 |
+
st.markdown('</div>', unsafe_allow_html=True)
|
828 |
+
|
829 |
+
# Styled analysis button
|
830 |
+
if st.button("▶️ Initiate Analysis", use_container_width=True):
|
831 |
+
with st.spinner("Processing image..."):
|
832 |
+
# Use the selected API provider
|
833 |
+
api_choice = 'groq' if api_provider == "Groq" else 'openai'
|
834 |
+
report = generate_radiology_report(uploaded_file, api_choice)
|
835 |
+
|
836 |
+
if report:
|
837 |
+
st.session_state.analysis_result = report
|
838 |
+
st.rerun()
|
839 |
+
st.markdown('</div>', unsafe_allow_html=True)
|
840 |
+
|
841 |
+
# ======================
|
842 |
+
# APPLICATION ENTRYPOINT
|
843 |
+
# ======================
|
844 |
+
def main():
|
845 |
+
"""Primary application controller"""
|
846 |
+
# Check if dark mode is in session state, default to true
|
847 |
+
if 'dark_mode' not in st.session_state:
|
848 |
+
st.session_state.dark_mode = True
|
849 |
+
|
850 |
+
configure_application()
|
851 |
+
|
852 |
+
render_sidebar()
|
853 |
+
display_main_interface()
|
854 |
+
|
855 |
+
if __name__ == "__main__":
|
856 |
+
main()
|
857 |
+
|