Mbi2Spi / markers.py
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breast_markers = ['HER2',
'TAPAN8',
'CD15',
'CD206',
'CD11b',
'HLA_DR',
'H3',
'CD8a',
'ISG15',
'CD14',
'ZC3HV1',
'Collagen1',
'CD4',
'CD66b',
'ALDH1',
'FOXP3',
'SMA',
'CD24',
'CD44',
'CD54',
'PPARG',
'CD31',
'PD1',
'CD19',
'CD69',
'PKCD',
'Ki67',
'ER',
'CD11c',
'CD27',
'LPS',
'CD11a',
'PR',
'CD3',
'CD68',
'CD83',
'LTA',
'IFI6',
'CD45',
'CDH1',
'CD62L']
pancreatic_markers = ['PGAM1',
'CD44',
'Amy2A',
'PGK1',
'PGAM5',
'CD99',
'CoL1',
'TALDO',
'ALDOB',
'ALDO',
'HK2',
'HK3',
'TPI',
'PKM',
'LDH',
'CK7',
'PDPN',
'HK1',
'NSE',
'AMF',
'PFKM',
'CD45',
'PGAM4',
'GAPDH',
'CD31',
'ECAD',
'PGAM2',
'aSMA',
'LDHB']
prostatic_markers = ['CXCR4',
'EGFR',
'LAG-3',
'CD278',
'PSMA',
'CD15',
'CD134',
'CTLA4',
'Nestin',
'CD16',
'CD56',
'PD-1',
'CD11b',
'CD66a',
'CXCL12',
'CCR7',
'IDO',
'CD73',
'CD33',
'VEGF',
'CD8a',
'aSMA',
'CD14',
'AMACR',
'CD20',
'Ki-67',
'CD4',
'SOX-9',
'B7-H4',
'CD11C',
'IFNgamma',
'CD25',
'Pan-Keratin',
'Pan-Actin',
'CD45AR',
'CD74',
'CD276',
'HLA-DR',
'CD31',
'CD45RO',
'TGFbeta',
'CD366',
'CD19',
'PSA',
'Foxp3',
'EpCAM',
'GranzymeB',
'BCL-2',
'ARG1',
'CD27',
'hFAP',
'PDL-2',
'Keratin8',
'PDL-1',
'CD127',
'CD304',
'CD3',
'CD68',
'AR',
'CD45',
'Vista',
'CD62L',
'CD163',
'pan-actin']