Datasets:

HHS-Official
/

resp-lens

Season stringclasses 3 values	Week int64 202k 202k	Virus stringclasses 3 values	Region stringclasses 11 values	Age Group stringclasses 7 values	Number Positive int64 0 6.5k	Number Tested int64 0 12.9k	Percent Positive float64 0 100
2021-22	202,147	SARS-CoV-2	Region 2	0-4 years	0	7	0
2021-22	202,147	SARS-CoV-2	Region 2	5-17 years	0	6	0
2021-22	202,147	SARS-CoV-2	Region 2	18-24 years	2	24	8.33
2021-22	202,147	SARS-CoV-2	Region 2	25-49 years	22	125	17.6
2021-22	202,147	SARS-CoV-2	Region 2	50-64 years	32	104	30.77
2021-22	202,147	SARS-CoV-2	Region 2	65+ years	19	100	19
2021-22	202,147	SARS-CoV-2	Region 3	0-4 years	13	67	19.4
2021-22	202,147	SARS-CoV-2	Region 3	5-17 years	9	28	32.14
2021-22	202,147	SARS-CoV-2	Region 3	18-24 years	2	16	12.5
2021-22	202,147	SARS-CoV-2	Region 3	25-49 years	18	56	32.14
2021-22	202,147	SARS-CoV-2	Region 3	50-64 years	24	68	35.29
2021-22	202,147	SARS-CoV-2	Region 3	65+ years	26	104	25
2021-22	202,147	SARS-CoV-2	Region 5	0-4 years	0	1	0
2021-22	202,147	SARS-CoV-2	Region 5	5-17 years	1	3	33.33
2021-22	202,147	SARS-CoV-2	Region 5	18-24 years	5	16	31.25
2021-22	202,147	SARS-CoV-2	Region 5	25-49 years	22	44	50
2021-22	202,147	SARS-CoV-2	Region 5	50-64 years	15	32	46.88
2021-22	202,147	SARS-CoV-2	Region 5	65+ years	13	31	41.94
2021-22	202,147	SARS-CoV-2	Region 6	0-4 years	0	5	0
2021-22	202,147	SARS-CoV-2	Region 6	5-17 years	1	2	50
2021-22	202,147	SARS-CoV-2	Region 6	18-24 years	3	12	25
2021-22	202,147	SARS-CoV-2	Region 6	25-49 years	11	59	18.64
2021-22	202,147	SARS-CoV-2	Region 6	50-64 years	4	49	8.16
2021-22	202,147	SARS-CoV-2	Region 6	65+ years	2	39	5.13
2021-22	202,147	SARS-CoV-2	Region 8	0-4 years	42	681	6.17
2021-22	202,147	SARS-CoV-2	Region 8	5-17 years	50	301	16.61
2021-22	202,147	SARS-CoV-2	Region 8	18-24 years	46	203	22.66
2021-22	202,147	SARS-CoV-2	Region 8	25-49 years	290	695	41.73
2021-22	202,147	SARS-CoV-2	Region 8	50-64 years	152	416	36.54
2021-22	202,147	SARS-CoV-2	Region 8	65+ years	213	623	34.19
2021-22	202,147	SARS-CoV-2	Region 9	0-4 years	0	1	0
2021-22	202,147	SARS-CoV-2	Region 9	5-17 years	0	0	0
2021-22	202,147	SARS-CoV-2	Region 9	18-24 years	0	1	0
2021-22	202,147	SARS-CoV-2	Region 9	25-49 years	0	2	0
2021-22	202,147	SARS-CoV-2	Region 9	50-64 years	0	0	0
2021-22	202,147	SARS-CoV-2	Region 9	65+ years	0	3	0
2021-22	202,147	Influenza	Region 2	0-4 years	0	7	0
2021-22	202,147	Influenza	Region 2	5-17 years	0	4	0
2021-22	202,147	Influenza	Region 2	18-24 years	5	17	29.41
2021-22	202,147	Influenza	Region 2	25-49 years	2	52	3.85
2021-22	202,147	Influenza	Region 2	50-64 years	0	49	0
2021-22	202,147	Influenza	Region 2	65+ years	0	58	0
2021-22	202,147	Influenza	Region 3	0-4 years	0	65	0
2021-22	202,147	Influenza	Region 3	5-17 years	0	22	0
2021-22	202,147	Influenza	Region 3	18-24 years	4	14	28.57
2021-22	202,147	Influenza	Region 3	25-49 years	2	35	5.71
2021-22	202,147	Influenza	Region 3	50-64 years	1	56	1.79
2021-22	202,147	Influenza	Region 3	65+ years	1	73	1.37
2021-22	202,147	Influenza	Region 5	0-4 years	0	0	0
2021-22	202,147	Influenza	Region 5	5-17 years	0	2	0
2021-22	202,147	Influenza	Region 5	18-24 years	0	7	0
2021-22	202,147	Influenza	Region 5	25-49 years	0	24	0
2021-22	202,147	Influenza	Region 5	50-64 years	0	13	0
2021-22	202,147	Influenza	Region 5	65+ years	0	14	0
2021-22	202,147	Influenza	Region 6	0-4 years	0	5	0
2021-22	202,147	Influenza	Region 6	5-17 years	0	2	0
2021-22	202,147	Influenza	Region 6	18-24 years	1	12	8.33
2021-22	202,147	Influenza	Region 6	25-49 years	1	59	1.69
2021-22	202,147	Influenza	Region 6	50-64 years	0	49	0
2021-22	202,147	Influenza	Region 6	65+ years	1	39	2.56
2021-22	202,147	Influenza	Region 8	0-4 years	2	655	0.31
2021-22	202,147	Influenza	Region 8	5-17 years	2	226	0.88
2021-22	202,147	Influenza	Region 8	18-24 years	5	105	4.76
2021-22	202,147	Influenza	Region 8	25-49 years	2	389	0.51
2021-22	202,147	Influenza	Region 8	50-64 years	2	287	0.7
2021-22	202,147	Influenza	Region 8	65+ years	1	443	0.23
2021-22	202,147	Influenza	Region 9	0-4 years	0	1	0
2021-22	202,147	Influenza	Region 9	5-17 years	0	0	0
2021-22	202,147	Influenza	Region 9	18-24 years	1	1	100
2021-22	202,147	Influenza	Region 9	25-49 years	0	2	0
2021-22	202,147	Influenza	Region 9	50-64 years	0	0	0
2021-22	202,147	Influenza	Region 9	65+ years	0	3	0
2021-22	202,147	RSV	Region 2	0-4 years	2	7	28.57
2021-22	202,147	RSV	Region 2	5-17 years	1	4	25
2021-22	202,147	RSV	Region 2	18-24 years	0	13	0
2021-22	202,147	RSV	Region 2	25-49 years	2	38	5.26
2021-22	202,147	RSV	Region 2	50-64 years	0	25	0
2021-22	202,147	RSV	Region 2	65+ years	3	26	11.54
2021-22	202,147	RSV	Region 3	0-4 years	14	50	28
2021-22	202,147	RSV	Region 3	5-17 years	3	18	16.67
2021-22	202,147	RSV	Region 3	18-24 years	0	10	0
2021-22	202,147	RSV	Region 3	25-49 years	0	22	0
2021-22	202,147	RSV	Region 3	50-64 years	0	38	0
2021-22	202,147	RSV	Region 3	65+ years	2	54	3.7
2021-22	202,147	RSV	Region 5	0-4 years	0	0	0
2021-22	202,147	RSV	Region 5	5-17 years	0	0	0
2021-22	202,147	RSV	Region 5	18-24 years	0	1	0
2021-22	202,147	RSV	Region 5	25-49 years	0	1	0
2021-22	202,147	RSV	Region 5	50-64 years	1	3	33.33
2021-22	202,147	RSV	Region 5	65+ years	0	6	0
2021-22	202,147	RSV	Region 6	0-4 years	2	5	40
2021-22	202,147	RSV	Region 6	5-17 years	0	2	0
2021-22	202,147	RSV	Region 6	18-24 years	1	12	8.33
2021-22	202,147	RSV	Region 6	25-49 years	0	59	0
2021-22	202,147	RSV	Region 6	50-64 years	1	49	2.04
2021-22	202,147	RSV	Region 6	65+ years	2	39	5.13
2021-22	202,147	RSV	Region 8	0-4 years	351	668	52.54
2021-22	202,147	RSV	Region 8	5-17 years	52	206	25.24
2021-22	202,147	RSV	Region 8	18-24 years	12	85	14.12
2021-22	202,147	RSV	Region 8	25-49 years	31	343	9.04

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RESP-LENS

Description

During the 2022-23 and 2023-24 respiratory illness seasons, the Respiratory Virus Laboratory Emergency Department Network Surveillance (RESP-LENS) system gathered electronic health record (EHR) data from nearly 100 hospitals associated with 24 participating sites located in 20 states and the District of Columbia. There was at least one site in each of the 10 Health and Human Services (HHS) regions. RESP-LENS collected reports of emergency department (ED) visits for acute respiratory illness (ARI) and corresponding viral testing results for SARS-CoV-2 (the virus that causes COVID-19), influenza (flu), and respiratory syncytial virus (RSV). Sites reported data for an average of approximately 77,000 ED visits weekly, of which 11,000 were associated with ARI and 4,000 of those were in children younger than 18 years. Between May 2023 and August 2024, these data were posted to CDC's RESP-LENS public dashboard, showing number tested, number positive, and percent positive for each of the three viruses mentioned, by virus, region, and age group. Due to budget constraints, RESP-LENS was not funded beyond the end of the 2024 fiscal year. RESP-LENS served as a valuable tool for public health and health care professionals and allowed users to visualize and understand trends in virus circulation, estimate disease burden, respond to outbreaks, and inform decisions and strategies for protecting public health.

Dataset Details

Publisher: Centers for Disease Control and Prevention
Temporal Coverage: 2022-23 and 2023-24 respiratory illness seasons (2 October 2022 through 31 August 2024; data from last 5 weeks of 2023-24 season not available)
Geographic Coverage: 24 sites/health systems with a total of >100 participating hospitals located in 20 states and the District of Columbia
Last Modified: 2024-12-26
Contact: RESP-LENS ([email protected])

Source

Original data can be found at: https://data.cdc.gov/d/ch5i-63ve

Usage

You can load this dataset using:

from datasets import load_dataset
 dataset = load_dataset('HHS-Official/resp-lens')

License

This dataset is licensed under http://opendefinition.org/licenses/odc-odbl/

Downloads last month: 31

Size of downloaded dataset files:

1.74 MB

Size of the auto-converted Parquet files:

324 kB

Number of rows:

32,760