compound_name
stringclasses
136 values
SMILES
stringclasses
135 values
permeability
float64
-7.39
-3.78
split
stringclasses
1 value
SMILES_ORIGINAL
stringclasses
135 values
IMAGE
imagewidth (px)
300
300
SELFIES
stringclasses
135 values
InChIKey
stringclasses
135 values
IUPAC
stringclasses
135 values
template_original
stringclasses
16 values
template
stringlengths
67
724
2g
COC(=O)c1c(F)cc(Cl)cc1-c1ccc([C@@H](C)NC(=O)C2(NC(=O)C(F)(F)F)CC2)c(F)c1
-4.568636
test
COC(=O)c1c(F)cc(Cl)cc1-c1ccc([C@@H](C)NC(=O)C2(NC(=O)C(F)(F)F)CC2)c(F)c1
[C][O][C][=Branch1][C][=O][C][=C][Branch1][C][F][C][=C][Branch1][C][Cl][C][=C][Ring1][Branch2][C][=C][C][=C][Branch2][Ring1][=C][C@@H1][Branch1][C][C][N][C][=Branch1][C][=O][C][Branch1][=C][N][C][=Branch1][C][=O][C][Branch1][C][F][Branch1][C][F][F][C][C][Ring1][#Branch2][C][Branch1][C][F][=C][Ring2][Ring1][=Branch1]
FISOJWXCEZIQPU-SNVBAGLBSA-N
methyl4-chloro-2-fluoro-6-[3-fluoro-4-[(1R)-1-[[1-[(2,2,2-trifluoroacetyl)amino]cyclopropanecarbonyl]amino]ethyl]phenyl]benzoate
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a, b, or c without using any additional words. Options: a. C=CCc1cc(OC)c(OC(C)C(O)c2ccc(OC)c(OC)c2)c(OC)c1 b. Cc1ccc(-c2nc3ccc(C)cn3c2CC(=O)N(C)C)cc1 c. COC(=O)c1c(F)cc(Cl)cc1-c1ccc([C@@H](C)NC(=O)C2(NC(=O)C(F)(F)F)CC2)c(F)c1 Answer: c
Cisapride
COc1cc(N)c(Cl)cc1C(=O)NC1CCN(CCCOc2ccc(F)cc2)CC1OC
-4.52
test
COc1cc(N)c(Cl)cc1C(=O)NC1CCN(CCCOc2ccc(F)cc2)CC1OC
[C][O][C][=C][C][Branch1][C][N][=C][Branch1][C][Cl][C][=C][Ring1][Branch2][C][=Branch1][C][=O][N][C][C][C][N][Branch1][S][C][C][C][O][C][=C][C][=C][Branch1][C][F][C][=C][Ring1][#Branch1][C][C][Ring1][P][O][C]
DCSUBABJRXZOMT-UHFFFAOYSA-N
4-amino-5-chloro-N-[1-[3-(4-fluorophenoxy)propyl]-3-methoxypiperidin-4-yl]-2-methoxybenzamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a, b, or c without using any additional words. Options: (a) C=C(c1ccccc1)[C@H]1OC[C@@H](NC(=O)Cc2ccccc2)[C@H](C)O1 (b) CN1C(=O)CC(N2CCCN(CC/C=C3/c4ccccc4CCc4ccc(CC(=O)O)cc43)CC2)N(C)C1=O (c) COc1cc(N)c(Cl)cc1C(=O)NC1CCN(CCCOc2ccc(F)cc2)CC1OC Answer: c
Methyldopa
C[C@@](N)(Cc1ccc(O)c(O)c1)C(=O)O
-6.619894
test
C[C@@](N)(Cc1ccc(O)c(O)c1)C(=O)O
[C][C@@][Branch1][C][N][Branch1][S][C][C][=C][C][=C][Branch1][C][O][C][Branch1][C][O][=C][Ring1][Branch2][C][=Branch1][C][=O][O]
CJCSPKMFHVPWAR-SNVBAGLBSA-N
(2R)-2-amino-3-(3,4-dihydroxyphenyl)-2-methylpropanoic acid
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a, b, c, or d without using any other words. Options: a C[C@@](N)(Cc1ccc(O)c(O)c1)C(=O)O b Cn1c(N2CCCN(CCCN3c4ccccc4Sc4ccc(CC(=O)O)cc43)CC2)cc(=O)n(C)c1=O c Cc1ccc(N2CCN(C(=O)[C@H](C)Cc3ccc(Cl)cc3)CC2)c([C@@H](NC(=O)CCN)C(C)C)c1 d Nc1nc(=O)c2ncn([C@@H]3C[C@H](CO)[C@H]3CO)c2[nH]1 Answer: a
N-Acetyl-D-leucyl-D-phenylalanine N-Methylamide (4)
CNC(=O)[C@@H](Cc1ccccc1)NC(=O)[C@@H](CC(C)C)NC(C)=O
-5.214224
test
CNC(=O)[C@@H](Cc1ccccc1)NC(=O)[C@@H](CC(C)C)NC(C)=O
[C][N][C][=Branch1][C][=O][C@@H1][Branch1][#Branch2][C][C][=C][C][=C][C][=C][Ring1][=Branch1][N][C][=Branch1][C][=O][C@@H1][Branch1][#Branch1][C][C][Branch1][C][C][C][N][C][Branch1][C][C][=O]
NJNNKSGOBUNLHA-HZPDHXFCSA-N
(2R)-2-acetamido-4-methyl-N-[(2R)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]pentanamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a or b without using any additional words. Options: (a) CNC(=O)[C@@H](Cc1ccccc1)NC(=O)[C@@H](CC(C)C)NC(C)=O (b) NCc1cccc(-n2nc(C(F)(F)F)cc2C(=O)Nc2ccc(-c3ccccc3S(N)(=O)=O)cc2F)c1 Answer: a
10
N=C(N)c1cccc(CC(CC(=O)N2CCNCC2)NS(=O)(=O)c2ccc3ccccc3c2)c1
-7.031226
test
N=C(N)c1cccc(CC(CC(=O)N2CCNCC2)NS(=O)(=O)c2ccc3ccccc3c2)c1
[N][=C][Branch1][C][N][C][=C][C][=C][C][Branch2][Ring2][Branch2][C][C][Branch1][=C][C][C][=Branch1][C][=O][N][C][C][N][C][C][Ring1][=Branch1][N][S][=Branch1][C][=O][=Branch1][C][=O][C][=C][C][=C][C][=C][C][=C][C][Ring1][=Branch1][=C][Ring1][#Branch2][=C][Ring2][Ring1][#C]
SZTDZPPTMKDUAQ-UHFFFAOYSA-N
3-[2-(naphthalen-2-ylsulfonylamino)-4-oxidanylidene-4-piperazin-1-yl-butyl]benzenecarboximidamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a, b, c, or d without using any other words. Options: a) Cn1c(N2CCCN(CCCN3c4ccccc4Sc4cccc(C(=O)O)c43)CC2)cc(=O)n(C)c1=O b) CNC(=O)[C@H](Cc1ccccc1)N(C)C(=O)[C@@H](Cc1ccccc1)N(C)C(=O)[C@H](Cc1ccccc1)N(C)C(C)=O c) CC(C)[C@H](N)C(=O)OC[C@H]1O[C@@H](n2ccc(O)nc2=O)[C@@H](O)[C@@H]1O d) N=C(N)c1cccc(CC(CC(=O)N2CCNCC2)NS(=O)(=O)c2ccc3ccccc3c2)c1 Answer: d
5'-L-glycyl-L-leucyl-floxuridine
CC(C)CC(NC(=O)CN)C(=O)OC[C@@H]1O[C@H](n2cc(F)c(=O)[nH]c2=O)C[C@H]1O
-5.200675
test
CC(C)CC(NC(=O)CN)C(=O)OC[C@@H]1O[C@H](n2cc(F)c(=O)[nH]c2=O)C[C@H]1O
[C][C][Branch1][C][C][C][C][Branch1][Branch2][N][C][=Branch1][C][=O][C][N][C][=Branch1][C][=O][O][C][C@@H1][O][C@H1][Branch1][S][N][C][=C][Branch1][C][F][C][=Branch1][C][=O][NH1][C][Ring1][Branch2][=O][C][C@H1][Ring1][=C][O]
SEZHTSJNDLIZFF-BOZUGAJUSA-N
[(2S,3R,5S)-5-[5-fluoranyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-oxolan-2-yl]methyl2-(2-azanylethanoylamino)-4-methyl-pentanoate
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a, b, or c without using any additional words. Options: (a) CN1C(C(=O)Nc2ccccn2)=C(O)c2ccccc2S1(=O)=O (b) CC(C)CC(NC(=O)CN)C(=O)OC[C@@H]1O[C@H](n2cc(F)c(=O)[nH]c2=O)C[C@H]1O (c) C=CCc1cc(OC)c(OC(C)Cc2cc(OC)c(OC)c(OC)c2)c(OC)c1 Answer: b
N-[5-[(4-Dimethylaminobenzoyl)amino]pentyl]-2-mercaptoacetamide (S2)
CN(C)c1ccc(C(=O)NCCCCCNC(=O)CS)cc1
-5.132448
test
CN(C)c1ccc(C(=O)NCCCCCNC(=O)CS)cc1
[C][N][Branch1][C][C][C][=C][C][=C][Branch2][Ring1][C][C][=Branch1][C][=O][N][C][C][C][C][C][N][C][=Branch1][C][=O][C][S][C][=C][Ring2][Ring1][Ring1]
SGOHSANPZHQNKM-UHFFFAOYSA-N
4-(dimethylamino)-N-[5-[(2-sulfanylacetyl)amino]pentyl]benzamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a, b, c, d, or e without using any other words. Options: a.) Cc1ccc(-c2nc3ccc(C)cn3c2CC(=O)N(C)C)cc1 b.) CO/N=C(\C(=O)N[C@@H]1C(=O)N2C(C(=O)O)=C(CSc3nc(=O)c(=O)[nH]n3C)CS[C@H]12)c1csc(N)n1 c.) COc1ccc(-c2oc3c(CC=C(C)C)c(O[C@@H]4O[C@H](CO)[C@@H](O)[C@H](O)[C@H]4O)cc(O)c3c(=O)c2O[C@H]2O[C@H](C)[C@@H](O)[C@H](O)[C@@H]2O)cc1 d.) CN(C)c1ccc(C(=O)NCCCCCNC(=O)CS)cc1 e.) CCc1oc(O)c(Cc2c(O)c(CC=C(C)C)c(O)c(C(C)=O)c2O)c(=O)c1C Answer: d
Vorinostat (SAHA-suberoylanilide hydroxamic acid)
O=C(CCCCCCC(=O)Nc1ccccc1)NO
-5.629466
test
O=C(CCCCCCC(=O)Nc1ccccc1)NO
[O][=C][Branch2][Ring1][Ring2][C][C][C][C][C][C][C][=Branch1][C][=O][N][C][=C][C][=C][C][=C][Ring1][=Branch1][N][O]
WAEXFXRVDQXREF-UHFFFAOYSA-N
N'-hydroxy-N-phenyloctanediamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a or b without using any other words. Options: a: CNC(=O)[C@@H](Cc1ccccc1)NC(=O)[C@@H](CC1CCCCC1)NC(C)=O b: O=C(CCCCCCC(=O)Nc1ccccc1)NO Answer: b
10b
CC(C)(NC(=O)c1cc2ccccc2s1)C(=O)N[C@H](Cc1ccccc1)C(=O)NCCCN1CCOCC1
-5.328951
test
CC(C)(NC(=O)c1cc2ccccc2s1)C(=O)N[C@H](Cc1ccccc1)C(=O)NCCCN1CCOCC1
[C][C][Branch1][C][C][Branch2][Ring1][Ring1][N][C][=Branch1][C][=O][C][=C][C][=C][C][=C][C][=C][Ring1][=Branch1][S][Ring1][=Branch2][C][=Branch1][C][=O][N][C@H1][Branch1][#Branch2][C][C][=C][C][=C][C][=C][Ring1][=Branch1][C][=Branch1][C][=O][N][C][C][C][N][C][C][O][C][C][Ring1][=Branch1]
SQYYANNTSKMXLF-HSZRJFAPSA-N
N-[2-methyl-1-[[(2R)-1-(3-morpholin-4-ylpropylamino)-1-oxo-3-phenylpropan-2-yl]amino]-1-oxopropan-2-yl]-1-benzothiophene-2-carboxamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a, b, or c without using any other words. Options: a. C=C(C)CNc1ccc(C(C)C(=O)O)cc1 b. CC(C)(NC(=O)c1cc2ccccc2s1)C(=O)N[C@H](Cc1ccccc1)C(=O)NCCCN1CCOCC1 c. Cn1c(N2CCN(CCCN3c4ccccc4Sc4ccc(CCC(=O)O)cc43)CC2)cc(=O)n(C)c1=O Answer: b
Ethylparaben
CCOC(=O)c1ccc(O)cc1
-4.810291
test
CCOC(=O)c1ccc(O)cc1
[C][C][O][C][=Branch1][C][=O][C][=C][C][=C][Branch1][C][O][C][=C][Ring1][#Branch1]
NUVBSKCKDOMJSU-UHFFFAOYSA-N
ethyl4-hydroxybenzoate
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a or b without using any other words. Options: (a) CCOC(=O)c1ccc(O)cc1 (b) CC(O)(CS(=O)(=O)c1ccc(F)cc1)C(=O)Nc1ccc(C#N)c(C(F)(F)F)c1 Answer: a
3'-L-Ile-FUdR
CC[C@H](C)[C@H](N)C(=O)O[C@@H]1C[C@@H](n2cc(F)c(=O)[nH]c2=O)O[C@H]1CO
-5.56
test
CC[C@H](C)[C@H](N)C(=O)O[C@@H]1C[C@@H](n2cc(F)c(=O)[nH]c2=O)O[C@H]1CO
[C][C][C@H1][Branch1][C][C][C@H1][Branch1][C][N][C][=Branch1][C][=O][O][C@@H1][C][C@@H1][Branch1][S][N][C][=C][Branch1][C][F][C][=Branch1][C][=O][NH1][C][Ring1][Branch2][=O][O][C@H1][Ring1][=C][C][O]
FDDDGHQUKSWDLZ-IXLGGCIWSA-N
[(2S,3R,5S)-5-[5-fluoranyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-2-(hydroxymethyl)oxolan-3-yl](2S,3S)-2-azanyl-3-methyl-pentanoate
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a, b, or c without using any other words. Options: a) CC[C@H](C)[C@H](N)C(=O)O[C@@H]1C[C@@H](n2cc(F)c(=O)[nH]c2=O)O[C@H]1CO b) O=C(NC1(C(=O)N[C@H](Cc2ccccc2)C(=O)NCC2CCN(CC3CCOCC3)CC2)CCCC1)c1cc2ccc(C(F)(F)F)cc2s1 c) c1ccc(Cn2nnnc2C(c2ccc(Cn3cncn3)cc2)N2CCCN(C3CCC3)CC2)cc1 Answer: a
5'-L-Asp-FUdR
NC(CC(=O)O)C(=O)OC[C@@H]1O[C@H](n2cc(F)c(=O)[nH]c2=O)C[C@H]1O
-6.49
test
NC(CC(=O)O)C(=O)OC[C@@H]1O[C@H](n2cc(F)c(=O)[nH]c2=O)C[C@H]1O
[N][C][Branch1][#Branch1][C][C][=Branch1][C][=O][O][C][=Branch1][C][=O][O][C][C@@H1][O][C@H1][Branch1][S][N][C][=C][Branch1][C][F][C][=Branch1][C][=O][NH1][C][Ring1][Branch2][=O][C][C@H1][Ring1][=C][O]
DEMJKVUJSKHPIJ-UXGQUHLOSA-N
3-azanyl-4-[[(2S,3R,5S)-5-[5-fluoranyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-oxolan-2-yl]methoxy]-4-oxidanylidene-butanoicacid
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a, b, or c without using any other words. Options: a. NC(CC(=O)O)C(=O)OC[C@@H]1O[C@H](n2cc(F)c(=O)[nH]c2=O)C[C@H]1O b. C=C(C)C(COc1c2occc2cc2ccc(=O)oc12)OC(C)(C)C(O)COc1c2occc2cc2ccc(=O)oc12 c. Cc1cc(NS(=O)(=O)c2ccc(N)cc2)no1 Answer: a
2c
N=C(N)c1cccc(-n2nc(C(F)(F)F)cc2C(=O)Nc2ncc(-c3ccccc3S(N)(=O)=O)cn2)c1
-7
test
N=C(N)c1cccc(-n2nc(C(F)(F)F)cc2C(=O)Nc2ncc(-c3ccccc3S(N)(=O)=O)cn2)c1
[N][=C][Branch1][C][N][C][=C][C][=C][C][Branch2][Ring2][P][N][N][=C][Branch1][=Branch2][C][Branch1][C][F][Branch1][C][F][F][C][=C][Ring1][=Branch2][C][=Branch1][C][=O][N][C][=N][C][=C][Branch1][P][C][=C][C][=C][C][=C][Ring1][=Branch1][S][Branch1][C][N][=Branch1][C][=O][=O][C][=N][Ring1][S][=C][Ring2][Ring2][C]
CMCYVWKFRRVLKG-UHFFFAOYSA-N
2-(3-carbamimidoylphenyl)-N-[5-(2-sulfamoylphenyl)pyrimidin-2-yl]-5-(trifluoromethyl)pyrazole-3-carboxamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a, b, or c without using any additional words. Options: [a] CC(=O)NCC(=O)N[C@@H](CCCCN)C(=O)N[C@@H](C)C(N)=O [b] CN1C(=O)CC(N2CCN(CC/C=C3/c4ccccc4COc4ccc(CC(=O)O)cc43)CC2)N(C)C1=O [c] N=C(N)c1cccc(-n2nc(C(F)(F)F)cc2C(=O)Nc2ncc(-c3ccccc3S(N)(=O)=O)cn2)c1 Answer: c
zidovudine
Cc1cn([C@H]2C[C@H](N=[N+]=[N-])[C@@H](CO)O2)c(=O)[nH]c1=O
-5.06
test
Cc1cn([C@H]2C[C@H](N=[N+]=[N-])[C@@H](CO)O2)c(=O)[nH]c1=O
[C][C][=C][N][Branch1][P][C@H1][C][C@H1][Branch1][Ring2][N][=N+1][=N-1][C@@H1][Branch1][Ring1][C][O][O][Ring1][#Branch2][C][=Branch1][C][=O][NH1][C][Ring1][P][=O]
HBOMLICNUCNMMY-XLPZGREQSA-N
1-[(2R,4S,5S)-4-azido-5-(hydroxymethyl)oxolan-2-yl]-5-methylpyrimidine-2,4-dione
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a, b, c, or d without using any other words. Options: [a] CC(C)NC[C@H](COc1ccc(CCOCC2CC2)cc1)OC(=O)C1CC1 [b] Cc1cn([C@H]2C[C@H](N=[N+]=[N-])[C@@H](CO)O2)c(=O)[nH]c1=O [c] CCOC(=O)[C@H](CCc1ccccc1)N[C@@H](C)C(=O)N1CCC[C@H]1C(=O)O [d] CCCCC(=O)NS(=O)(=O)c1ccccc1-c1ccc(Cn2c(CCC)nc(CC)c2C(=O)O)c(F)c1 Answer: b
amfenac sodium
Nc1c(CC(=O)[O-])cccc1C(=O)c1ccccc1.O.[Na+]
-4.52
test
Nc1c(CC(=O)[O-])cccc1C(=O)c1ccccc1.O.[Na+]
[N][C][=C][Branch1][#Branch1][C][C][=Branch1][C][=O][O-1][C][=C][C][=C][Ring1][#Branch2][C][=Branch1][C][=O][C][=C][C][=C][C][=C][Ring1][=Branch1].[O].[Na+1]
QZNJPJDUBTYMRS-UHFFFAOYSA-M
sodium;2-(2-amino-3-benzoylphenyl)acetate;hydrate
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a, b, c, or d without using any additional words. Options: (a) Nc1c(CC(=O)[O-])cccc1C(=O)c1ccccc1.O.[Na+] (b) O=c1[nH]c(=O)n([C@@H]2O[C@H](CO)[C@@H](O)[C@@H]2O)cc1/C=C/Br (c) COc1ccc2c(O[C@@H]3C[C@H]4C(=O)N[C@]5(C(=O)NS(=O)(=O)C6CC6)C[C@H]5/C=C\CCCCN(C)C(=O)[C@@H]4C3)nc(-c3nc(C(C)C)cs3)nc2c1 (d) CN1[C@@H]2CC[C@@H]1CC(OC(=O)C(CO)c1ccccc1)C2 Answer: a
epinephrine
CNC[C@H](O)c1ccc(O)c(O)c1
-6.125
test
CNC[C@H](O)c1ccc(O)c(O)c1
[C][N][C][C@H1][Branch1][C][O][C][=C][C][=C][Branch1][C][O][C][Branch1][C][O][=C][Ring1][Branch2]
UCTWMZQNUQWSLP-VIFPVBQESA-N
4-[(1R)-1-hydroxy-2-(methylamino)ethyl]benzene-1,2-diol
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a, b, c, or d without using any other words. Options: a.) CC(C(=O)O)c1ccc(CC2CCCC2=O)cc1 b.) CNC[C@H](O)c1ccc(O)c(O)c1 c.) CC(C)(C)NC(=O)[C@@H]1C[C@@H]2CCCC[C@@H]2CN1C[C@@H](O)[C@H](Cc1ccccc1)NC(=O)[C@H](CC(N)=O)NC(=O)c1ccc2ccccc2n1 d.) CCCOC(=O)c1ccc(O)cc1 Answer: b
1033-Dextromethorphan (DEM)
COc1ccc2c(c1)[C@@]13CCCC[C@@H]1[C@@H](C2)N(C)CC3
-4.628932
test
COc1ccc2c(c1)[C@@]13CCCC[C@@H]1[C@@H](C2)N(C)CC3
[C][O][C][=C][C][=C][C][=Branch1][Ring2][=C][Ring1][=Branch1][C@@][C][C][C][C][C@@H1][Ring1][=Branch1][C@@H1][Branch1][Ring2][C][Ring1][O][N][Branch1][C][C][C][C][Ring1][N]
MKXZASYAUGDDCJ-KBAYOESNSA-N
(1R,9R,10S)-4-methoxy-17-methyl-17-azatetracyclo[7.5.3.01,10.02,7]heptadeca-2(7),3,5-triene
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a, b, c, or d without using any additional words. Options: a) CNC[C@H](O)c1ccc(O)c(O)c1 b) COc1ccc2c(=O)cc(-c3ccccc3)oc2c1 c) COc1ccc2c(c1)[C@@]13CCCC[C@@H]1[C@@H](C2)N(C)CC3 d) CC(=O)N1CCN(c2ccc(OC[C@@H]3CO[C@@](Cn4ccnc4)(c4ccc(Cl)cc4Cl)O3)cc2)CC1 Answer: c
Sulfanilic acid
Nc1ccc(S(=O)(=O)O)cc1
-5.43
test
Nc1ccc(S(=O)(=O)O)cc1
[N][C][=C][C][=C][Branch1][=Branch2][S][=Branch1][C][=O][=Branch1][C][=O][O][C][=C][Ring1][#Branch2]
HVBSAKJJOYLTQU-UHFFFAOYSA-N
4-aminocyclohexa-1,3,5-triene-1-sulfonicacid
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a, b, c, or d without using any other words. Options: [a] C=CCNC(=O)C(=O)C(CCC)NC(=O)C1C2C(CN1C(=O)C(NC(=O)NC(C(=O)C(C)C)C(C)C)C(C)(C)C)C2(C)C [b] Nc1ccc(S(=O)(=O)O)cc1 [c] CN1C(=O)CC(N2CCN(CC/C=C3/c4ccccc4COc4ccc(CC(=O)O)cc43)CC2)N(C)C1=O [d] NCc1cccc(-n2nc(C(F)(F)F)cc2C(=O)Nc2ccc(-c3ccccc3S(N)(=O)=O)cc2F)c1 Answer: b
Methyl gallate
COC(=O)c1cc(O)c(O)c(O)c1
-5.39
test
COC(=O)c1cc(O)c(O)c(O)c1
[C][O][C][=Branch1][C][=O][C][=C][C][Branch1][C][O][=C][Branch1][C][O][C][Branch1][C][O][=C][Ring1][=Branch2]
FBSFWRHWHYMIOG-UHFFFAOYSA-N
methyl 3,4,5-trihydroxybenzoate
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a, b, c, or d without using any other words. Options: a O=C(NC1(C(=O)N[C@H](Cc2ccccc2)C(=O)NC2CCN(CC3CCOCC3)CC2)CCCC1)c1cc2ccccc2s1 b C#CC#CC/C=C\CCCCC/C=C/C(=O)NCC(C)CC c CN(C)CCCN1c2ccccc2Sc2ccccc21 d COC(=O)c1cc(O)c(O)c(O)c1 Answer: d
alminoprofen
C=C(C)CNc1ccc(C(C)C(=O)O)cc1
-4.34
test
C=C(C)CNc1ccc(C(C)C(=O)O)cc1
[C][=C][Branch1][C][C][C][N][C][=C][C][=C][Branch1][#Branch2][C][Branch1][C][C][C][=Branch1][C][=O][O][C][=C][Ring1][O]
FPHLBGOJWPEVME-UHFFFAOYSA-N
2-[4-(2-methylprop-2-enylamino)phenyl]propanoic acid
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a, b, c, or d without using any other words. Options: (a) C=C(C)CNc1ccc(C(C)C(=O)O)cc1 (b) Cc1cc(CC(=O)O)n(C)c1C(=O)c1ccc(Cl)cc1 (c) CC(=O)NCC1CN(c2ccc(C(C)=O)cc2)S(=O)N1C (d) O=C(O)c1ccccc1 Answer: a
5'-L-leucyl-L-glycyl-floxuridine
CC(C)CC(N)C(=O)NCC(=O)OC[C@@H]1O[C@H](n2cc(F)c(=O)[nH]c2=O)C[C@H]1O
-5.420681
test
CC(C)CC(N)C(=O)NCC(=O)OC[C@@H]1O[C@H](n2cc(F)c(=O)[nH]c2=O)C[C@H]1O
[C][C][Branch1][C][C][C][C][Branch1][C][N][C][=Branch1][C][=O][N][C][C][=Branch1][C][=O][O][C][C@@H1][O][C@H1][Branch1][S][N][C][=C][Branch1][C][F][C][=Branch1][C][=O][NH1][C][Ring1][Branch2][=O][C][C@H1][Ring1][=C][O]
TYJUAOADSAYVLK-JUIFTKJUSA-N
[(2S,3R,5S)-5-[5-fluoranyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-oxolan-2-yl]methyl2-[(2-azanyl-4-methyl-pentanoyl)amino]ethanoate
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a, b, c, d, or e without using any additional words. Options: a) CN1CCN(c2c(F)cc3c(=O)c(C(=O)O)cn(CCF)c3c2F)CC1 b) CC(C)CC(N)C(=O)NCC(=O)OC[C@@H]1O[C@H](n2cc(F)c(=O)[nH]c2=O)C[C@H]1O c) CC[C@H]1[C@@H]2C[C@@H]3[C@@H]4N(C)c5ccccc5[C@]45C[C@@H](C2[C@@H]5O)N3[C@@H]1O d) COc1ccc(CCN(C)CCCC(C#N)(c2ccc(OC)c(OC)c2)C(C)C)cc1OC e) COc1cc(OC)c2c(=O)cc(-c3ccccc3)oc2c1 Answer: b
Guanabenz
NC(N)=NN=Cc1c(Cl)cccc1Cl
-4.33
test
NC(N)=NN=Cc1c(Cl)cccc1Cl
[N][C][Branch1][C][N][=N][N][=C][C][=C][Branch1][C][Cl][C][=C][C][=C][Ring1][#Branch1][Cl]
WDZVGELJXXEGPV-UHFFFAOYSA-N
2-[(2,6-dichlorocyclohexa-1,3,5-trien-1-yl)methylideneamino]guanidine
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a, b, c, d, or e without using any other words. Options: a O=c1[nH]c(=O)n([C@H]2O[C@@H](CO)[C@H](O)[C@H]2O)cc1/C=C/Br b NC(N)=NN=Cc1c(Cl)cccc1Cl c CN1C(=O)CC(N2CCN(CC/C=C3/c4ccccc4CCc4ccc(CC(=O)O)cc43)CC2)N(C)C1=O d COc1ccc([C@@H]2CC(=O)c3c(O)cc(O)cc3O2)cc1O e C=C[C@H]1CN2CC[C@H]1C[C@@H]2[C@@H](O)c1ccnc2ccc(OC)cc12 Answer: b
enalapril
CCOC(=O)[C@H](CCc1ccccc1)N[C@@H](C)C(=O)N1CCC[C@H]1C(=O)O
-5.672
test
CCOC(=O)[C@H](CCc1ccccc1)N[C@@H](C)C(=O)N1CCC[C@H]1C(=O)O
[C][C][O][C][=Branch1][C][=O][C@H1][Branch1][O][C][C][C][=C][C][=C][C][=C][Ring1][=Branch1][N][C@@H1][Branch1][C][C][C][=Branch1][C][=O][N][C][C][C][C@H1][Ring1][Branch1][C][=Branch1][C][=O][O]
GBXSMTUPTTWBMN-XIRDDKMYSA-N
(2S)-1-[(2S)-2-[[(2S)-1-ethoxy-1-oxo-4-phenylbutan-2-yl]amino]propanoyl]pyrrolidine-2-carboxylicacid
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a, b, c, or d without using any additional words. Options: a.) CCOC(=O)[C@H](CCc1ccccc1)N[C@@H](C)C(=O)N1CCC[C@H]1C(=O)O b.) Cn1c(N2CCCN(CCCN3c4ccccc4Sc4cccc(C(=O)O)c43)CC2)cc(=O)n(C)c1=O c.) N=C(N)c1ccc2[nH]c(-c3ccccn3)nc2c1 d.) CC(C)(C)CC(=O)Nc1c(F)cc(C(=O)Nc2nccs2)cc1F Answer: a
Netivudine (882C87)
CC#Cc1cn([C@@H]2O[C@H](CO)[C@@H](O)[C@@H]2O)c(=O)[nH]c1=O
-5.168746
test
CC#Cc1cn([C@@H]2O[C@H](CO)[C@@H](O)[C@@H]2O)c(=O)[nH]c1=O
[C][C][#C][C][=C][N][Branch1][S][C@@H1][O][C@H1][Branch1][Ring1][C][O][C@@H1][Branch1][C][O][C@@H1][Ring1][Branch2][O][C][=Branch1][C][=O][NH1][C][Ring1][S][=O]
QLOCVMVCRJOTTM-SDNRWEOFSA-N
1-[(2R,3S,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-prop-1-ynylpyrimidine-2,4-dione
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a, b, or c without using any additional words. Options: a) CC1CCN(C(=O)CC(Cc2cccc(N)c2)NS(=O)(=O)c2ccc3ccccc3c2)CC1 b) NC(=O)[C@H](Cc1ccccc1)NC(=O)[C@H](Cc1ccccc1)NC(=O)[C@H](CCCN=C(N)N)NC(=O)[C@@H](N)Cc1ccc(O)cc1 c) CC#Cc1cn([C@@H]2O[C@H](CO)[C@@H](O)[C@@H]2O)c(=O)[nH]c1=O Answer: c
N-Acetyl-D-alanine Phenethylamide (8)
CC(=O)N[C@H](C)C(=O)NCCc1ccccc1
-4.609533
test
CC(=O)N[C@H](C)C(=O)NCCc1ccccc1
[C][C][=Branch1][C][=O][N][C@H1][Branch1][C][C][C][=Branch1][C][=O][N][C][C][C][=C][C][=C][C][=C][Ring1][=Branch1]
MCDHEYHDZSVVDX-SNVBAGLBSA-N
(2R)-2-acetamido-N-(2-phenylethyl)propanamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a, b, or c without using any additional words. Options: a: O=c1c(OC2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)c(-c2ccc(OC3O[C@H](CO)[C@@H](O)[C@H](O)[C@H]3O)c(O)c2)oc2cc(O)cc(O)c12 b: COC(=O)c1c(Cl)cc(Cl)cc1-c1cnc([C@@H](C)NC(=O)C2(NC(=O)C(F)(F)F)CC2)c(F)c1 c: CC(=O)N[C@H](C)C(=O)NCCc1ccccc1 Answer: c
N-Acetyl-D-alanyl-D-phenylalanine N-Methylamide (2)
CNC(=O)[C@@H](Cc1ccccc1)NC(=O)[C@@H](C)NC(C)=O
-5.74844
test
CNC(=O)[C@@H](Cc1ccccc1)NC(=O)[C@@H](C)NC(C)=O
[C][N][C][=Branch1][C][=O][C@@H1][Branch1][#Branch2][C][C][=C][C][=C][C][=C][Ring1][=Branch1][N][C][=Branch1][C][=O][C@@H1][Branch1][C][C][N][C][Branch1][C][C][=O]
YCAVXKLBMDQQNF-ZWNOBZJWSA-N
(2R)-2-[[(2R)-2-acetamidopropanoyl]amino]-N-methyl-3-phenylpropanamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a, b, c, d, or e without using any additional words. Options: [a] CC(C)CC(N)C(=O)NCC(=O)OC[C@@H]1O[C@H](n2cc(F)c(=O)[nH]c2=O)C[C@H]1O [b] CN1C2CC(OC(=O)C(CO)c3ccccc3)CC1C1OC12 [c] CNC(=O)[C@@H](Cc1ccccc1)NC(=O)[C@@H](C)NC(C)=O [d] COc1cc2ncnc(Nc3ccc(F)c(Cl)c3)c2cc1OCCCN1CCOCC1 [e] Clc1ccncc1 Answer: c
EF5292
CC(C)(C)C(=O)OCOC(=O)N1CCC(N2CCN(CC(=O)c3ccc(OCC(=O)OC4CCCCC4)cc3)C(=O)C2)CC1
-4.44
test
CC(C)(C)C(=O)OCOC(=O)N1CCC(N2CCN(CC(=O)c3ccc(OCC(=O)OC4CCCCC4)cc3)C(=O)C2)CC1
[C][C][Branch1][C][C][Branch1][C][C][C][=Branch1][C][=O][O][C][O][C][=Branch1][C][=O][N][C][C][C][Branch2][Ring2][=C][N][C][C][N][Branch2][Ring1][#C][C][C][=Branch1][C][=O][C][=C][C][=C][Branch1][S][O][C][C][=Branch1][C][=O][O][C][C][C][C][C][C][Ring1][=Branch1][C][=C][Ring1][P][C][=Branch1][C][=O][C][Ring2][Ring1][O][C][C][Ring2][Ring1][P]
TWESEFIUIFCUKF-UHFFFAOYSA-N
2,2-dimethylpropanoyloxymethyl 4-[4-[2-[4-(2-cyclohexyloxy-2-oxoethoxy)phenyl]-2-oxoethyl]-3-oxopiperazin-1-yl]piperidine-1-carboxylate
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a, b, c, or d without using any additional words. Options: a.) CC(C)(C)C(=O)OCOC(=O)N1CCC(N2CCN(CC(=O)c3ccc(OCC(=O)OC4CCCCC4)cc3)C(=O)C2)CC1 b.) CCOc1cccc(NC(=O)OCCN2CCCC2)c1 c.) CC(C)CC(N)C(=O)NCC(=O)OC[C@@H]1O[C@H](n2cc(F)c(=O)[nH]c2=O)C[C@H]1O d.) Cc1nc(-c2ccc(Cl)cc2-c2ccc([C@@H](C)NC(=O)C3(NC(=O)C(F)(F)F)CC3)c(F)c2)no1 Answer: a
Ac-D-phe-NH2
CC(=O)N[C@@H](Cc1ccccc1)C(N)=O
-5.10009
test
CC(=O)N[C@@H](Cc1ccccc1)C(N)=O
[C][C][=Branch1][C][=O][N][C@@H1][Branch1][#Branch2][C][C][=C][C][=C][C][=C][Ring1][=Branch1][C][Branch1][C][N][=O]
LRSBEAVFLIKKIO-JTQLQIEISA-N
(2S)-2-acetamido-3-phenylpropanamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a, b, c, or d without using any other words. Options: a.) CC(=O)N[C@@H](Cc1ccccc1)C(N)=O b.) OC[C@@H]1O[C@@](O)(CO)[C@H](O)[C@H]1O[C@@H]1O[C@H](CO)[C@H](O)[C@H](O)[C@H]1O c.) O=C1CCCN1CCCCN1CCN(c2cc(C(F)(F)F)ccn2)CC1 d.) CC[C@@]1(O)C(=O)OCc2c1cc1n(c2=O)Cc2cc3c(N(O)O)cccc3nc2-1 Answer: a
(-)-Epicatechin (36)
Oc1cc(O)c2c(c1)O[C@H](c1ccc(O)c(O)c1)[C@H](O)C2
-6.431192
test
Oc1cc(O)c2c(c1)O[C@H](c1ccc(O)c(O)c1)[C@H](O)C2
[O][C][=C][C][Branch1][C][O][=C][C][=Branch1][Ring2][=C][Ring1][#Branch1][O][C@H1][Branch1][#C][C][=C][C][=C][Branch1][C][O][C][Branch1][C][O][=C][Ring1][Branch2][C@H1][Branch1][C][O][C][Ring1][S]
PFTAWBLQPZVEMU-UKRRQHHQSA-N
(2R,3R)-2-(3,4-dihydroxyphenyl)-3,4-dihydro-2H-chromene-3,5,7-triol
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a, b, c, or d without using any other words. Options: a.) Oc1cc(O)c2c(c1)O[C@H](c1cc(O)c(O)c(O)c1)[C@H](O)C2 b.) CNC1(c2ccccc2Cl)CCCCC1=O c.) COc1cc(C(=O)N2CC[C@](CCN3CCC(C(N)=O)(c4ccccc4)CC3)(c3ccc(Cl)c(Cl)c3)C2)cc(OC)c1OC d.) Oc1cc(O)c2c(c1)O[C@H](c1ccc(O)c(O)c1)[C@H](O)C2 Answer: d
Ketamine
CNC1(c2ccccc2Cl)CCCCC1=O
-4.26
test
CNC1(c2ccccc2Cl)CCCCC1=O
[C][N][C][Branch1][#Branch2][C][=C][C][=C][C][=C][Ring1][=Branch1][Cl][C][C][C][C][C][Ring1][=N][=O]
YQEZLKZALYSWHR-UHFFFAOYSA-N
2-(2-chlorophenyl)-2-(methylamino)cyclohexan-1-one
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a, b, c, d, or e without using any additional words. Options: [a] NC(=O)N1C(=O)C(C(=O)c2cccs2)c2cc(Cl)ccc21 [b] COCCOCCOCC(=O)Nc1ccc(S(=O)(=O)Nc2nncs2)cc1 [c] CC1CCN(C(=O)CC(Cc2cccc(C(=N)N)c2)NS(=O)(=O)c2ccc3ccccc3c2)CC1 [d] O=C(CO)N1CCN(c2ccc(N3C[C@H](CNC(=S)C4CC4)OC3=O)cc2F)CC1 [e] CNC1(c2ccccc2Cl)CCCCC1=O Answer: e
26
Cn1c(N2CCN(CCCCN3c4ccccc4Sc4ccc(C(=O)O)cc43)CC2)cc(=O)n(C)c1=O
-4.69
test
Cn1c(N2CCN(CCCCN3c4ccccc4Sc4ccc(C(=O)O)cc43)CC2)cc(=O)n(C)c1=O
[C][N][C][Branch2][Ring2][N][N][C][C][N][Branch2][Ring1][S][C][C][C][C][N][C][=C][C][=C][C][=C][Ring1][=Branch1][S][C][=C][C][=C][Branch1][=Branch1][C][=Branch1][C][=O][O][C][=C][Ring1][=Branch2][Ring1][P][C][C][Ring2][Ring1][O][=C][C][=Branch1][C][=O][N][Branch1][C][C][C][Ring2][Ring2][Ring1][=O]
UQAJLTTZWHXNJH-UHFFFAOYSA-N
10-[4-[4-(1,3-dimethyl-2,6-dioxopyrimidin-4-yl)piperazin-1-yl]butyl]phenothiazine-2-carboxylic acid
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a or b without using any additional words. Options: [a] Cn1c(N2CCN(CCCCN3c4ccccc4Sc4ccc(C(=O)O)cc43)CC2)cc(=O)n(C)c1=O [b] Cn1cncc1CN1CC(N(Cc2ccccn2)S(=O)(=O)c2ccccn2)Cc2cc(C#N)ccc21 Answer: a
Tanshinol (TSL)
O=C(O)C(O)Cc1ccc(O)c(O)c1
-5.91182
test
O=C(O)C(O)Cc1ccc(O)c(O)c1
[O][=C][Branch1][C][O][C][Branch1][C][O][C][C][=C][C][=C][Branch1][C][O][C][Branch1][C][O][=C][Ring1][Branch2]
PAFLSMZLRSPALU-UHFFFAOYSA-N
3-(3,4-dihydroxyphenyl)-2-hydroxypropanoic acid
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a or b without using any other words. Options: [a] CC[C@@]1(O)C(=O)OCc2c1cc1n(c2=O)Cc2cc3ccccc3nc2-1 [b] O=C(O)C(O)Cc1ccc(O)c(O)c1 Answer: b
Promethazine
CC(CN1c2ccccc2Sc2ccccc21)N(C)C
-3.777772
test
CC(CN1c2ccccc2Sc2ccccc21)N(C)C
[C][C][Branch2][Ring1][=Branch1][C][N][C][=C][C][=C][C][=C][Ring1][=Branch1][S][C][=C][C][=C][C][=C][Ring1][=Branch1][Ring1][=C][N][Branch1][C][C][C]
PWWVAXIEGOYWEE-UHFFFAOYSA-N
N,N-dimethyl-1-phenothiazin-10-ylpropan-2-amine
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a, b, or c without using any other words. Options: a) COc1ccc(CC2c3cc(OC)c(OC)cc3CCN2C)cc1OC b) FC(F)(F)c1cccc(C2=CCN(CCc3ccc4ccccc4c3)CC2)c1 c) CC(CN1c2ccccc2Sc2ccccc21)N(C)C Answer: c
6
NS(=O)(=O)c1ccc(Cl)cc1
-4.262013
test
NS(=O)(=O)c1ccc(Cl)cc1
[N][S][=Branch1][C][=O][=Branch1][C][=O][C][=C][C][=C][Branch1][C][Cl][C][=C][Ring1][#Branch1]
HHHDJHHNEURCNV-UHFFFAOYSA-N
4-chlorobenzenesulfonamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a or b without using any additional words. Options: a.) NS(=O)(=O)c1ccc(Cl)cc1 b.) COc1ccc2c(O[C@@H]3C[C@H]4C(=O)N[C@]5(C(=O)NS(=O)(=O)C6CC6)C[C@H]5/C=C\CCCCN(C)C(=O)[C@@H]4C3)cc(-c3cccc(C(C)C)n3)nc2c1C Answer: a
H 244/45
CCC(=O)Nc1ccc(OCC(O)CNC(C)C)cc1
-5.219842
test
CCC(=O)Nc1ccc(OCC(O)CNC(C)C)cc1
[C][C][C][=Branch1][C][=O][N][C][=C][C][=C][Branch1][=C][O][C][C][Branch1][C][O][C][N][C][Branch1][C][C][C][C][=C][Ring1][#C]
BPENFEPYBVXUII-UHFFFAOYSA-N
N-[4-[2-hydroxy-3-(propan-2-ylamino)propoxy]phenyl]propanamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a or b without using any additional words. Options: a. Nc1ccc(S(=O)(=O)O)cc1 b. CCC(=O)Nc1ccc(OCC(O)CNC(C)C)cc1 Answer: b
Phencyclidine (PCP)
c1ccc(C2(N3CCCCC3)CCCCC2)cc1
-4.48
test
c1ccc(C2(N3CCCCC3)CCCCC2)cc1
[C][=C][C][=C][Branch2][Ring1][Ring1][C][Branch1][=Branch2][N][C][C][C][C][C][Ring1][=Branch1][C][C][C][C][C][Ring1][N][C][=C][Ring2][Ring1][C]
JTJMJGYZQZDUJJ-UHFFFAOYSA-N
1-(1-phenylcyclohexyl)piperidine
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a, b, c, or d without using any additional words. Options: a: CC(C)(C(=O)O)c1ccc(C(O)CCCN2CCC(C(O)(c3ccccc3)c3ccccc3)CC2)cc1.Cl b: c1ccc(C2(N3CCCCC3)CCCCC2)cc1 c: COc1ccc(CC2c3cc(OC)c(OC)cc3CCN2C)cc1OC d: COc1ccc2c(O[C@@H]3CC4C(=O)N[C@]5(C(=O)O)C[C@@H]5/C=C\CCCCC[C@H](NC(=O)OC5CCCC5)C(=O)N4C3)cc(-c3csc(NC(C)C)n3)nc2c1 Answer: b
Lisinopril
NCCCC[C@H](N[C@@H](CCc1ccccc1)C(=O)O)C(=O)N1CCC[C@@H]1C(=O)O
-6.66
test
NCCCC[C@H](N[C@@H](CCc1ccccc1)C(=O)O)C(=O)N1CCC[C@@H]1C(=O)O
[N][C][C][C][C][C@H1][Branch2][Ring1][Ring2][N][C@@H1][Branch1][O][C][C][C][=C][C][=C][C][=C][Ring1][=Branch1][C][=Branch1][C][=O][O][C][=Branch1][C][=O][N][C][C][C][C@@H1][Ring1][Branch1][C][=Branch1][C][=O][O]
RLAWWYSOJDYHDC-OKZBNKHCSA-N
(2R)-1-[(2S)-6-amino-2-[[(1S)-1-carboxy-3-phenylpropyl]amino]hexanoyl]pyrrolidine-2-carboxylic acid
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a, b, or c without using any other words. Options: a: c1ccc(C2(N3CCCCC3)CCCCC2)cc1 b: COC(=O)C[C@@H](C(=O)NN(Cc1ccc(/C=C\c2ccccc2)cc1)C[C@@](O)(Cc1ccccc1)C(=O)NC1c2ccccc2C[C@H]1O)C(C)(C)C c: NCCCC[C@H](N[C@@H](CCc1ccccc1)C(=O)O)C(=O)N1CCC[C@@H]1C(=O)O Answer: c
N-Acetyl-D-valine Phenethylamide (9a)
CC(=O)N[C@@H](C(=O)NCCc1ccccc1)C(C)C
-4.461091
test
CC(=O)N[C@@H](C(=O)NCCc1ccccc1)C(C)C
[C][C][=Branch1][C][=O][N][C@@H1][Branch1][S][C][=Branch1][C][=O][N][C][C][C][=C][C][=C][C][=C][Ring1][=Branch1][C][Branch1][C][C][C]
KDWYUXCCSWVIAK-CQSZACIVSA-N
(2R)-2-acetamido-3-methyl-N-(2-phenylethyl)butanamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a, b, c, or d without using any other words. Options: a.) CC1(C)CC(=O)N(CCCCN2CCN(c3ncccn3)CC2)C(=O)C1 b.) CC(=O)N[C@@H](C(=O)NCCc1ccccc1)C(C)C c.) CNCCN[C@H](c1cc(C)ccc1N1CCN(C(=O)[C@H](C)Cc2ccc(Cl)cc2F)CC1)C(C)C d.) O=C1c2c(O)cc(O)cc2OC(c2ccc(O)c(O)c2)C1O Answer: b
meloxicam
Cc1cnc(NC(=O)C2=C(O)c3ccccc3S(=O)(=O)N2C)s1
-4.71
test
Cc1cnc(NC(=O)C2=C(O)c3ccccc3S(=O)(=O)N2C)s1
[C][C][=C][N][=C][Branch2][Ring1][=C][N][C][=Branch1][C][=O][C][=C][Branch1][C][O][C][=C][C][=C][C][=C][Ring1][=Branch1][S][=Branch1][C][=O][=Branch1][C][=O][N][Ring1][=N][C][S][Ring2][Ring1][=Branch1]
ZRVUJXDFFKFLMG-UHFFFAOYSA-N
4-hydroxy-2-methyl-N-(5-methyl-1,3-thiazol-2-yl)-1,1-dioxo-1λ6,2-benzothiazine-3-carboxamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a, b, c, d, or e without using any other words. Options: [a] Cn1c(N2CCCN(CCCN3c4ccccc4Sc4ccc(C(=O)O)cc43)CC2)cc(=O)n(C)c1=O [b] COCN1C(=O)N(COC)C(=O)C(c2ccccc2)(c2ccccc2)C1=O [c] CO/N=C(/C(=O)N[C@@H]1C(=O)N2C(C(=O)O)=C(CSc3nc(=O)c(=O)[nH]n3C)CS[C@H]12)c1csc(N)n1 [d] CNS(=O)(=O)Cc1ccc2[nH]cc(CCN(C)C)c2c1 [e] Cc1cnc(NC(=O)C2=C(O)c3ccccc3S(=O)(=O)N2C)s1 Answer: e
884-14b
C=C(c1ccccc1)[C@H]1OC[C@@H](NC(=O)Cc2ccccc2)[C@H](C)O1
-5.050366
test
C=C(c1ccccc1)[C@H]1OC[C@@H](NC(=O)Cc2ccccc2)[C@H](C)O1
[C][=C][Branch1][=Branch2][C][=C][C][=C][C][=C][Ring1][=Branch1][C@H1][O][C][C@@H1][Branch1][#C][N][C][=Branch1][C][=O][C][C][=C][C][=C][C][=C][Ring1][=Branch1][C@H1][Branch1][C][C][O][Ring1][P]
KSOAVMSTMKUCJJ-SCWSEQNSSA-N
N-[(2S,4S,5R)-4-methyl-2-(1-phenylethenyl)-1,3-dioxan-5-yl]-2-phenylacetamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a, b, c, d, or e without using any other words. Options: [a] CC(CCc1ccccc1)NCC(O)c1ccc(O)c(C(N)=O)c1 [b] CC(C)(C)c1nn2ccccc2c1Cc1ccc(C(=O)N[C@@H]2CCOC[C@@H]2C(=O)NO)cc1 [c] COC(C)(C)CC[C@@H](O)[C@](C)(O)[C@H]1CC[C@@]2(O)C3=CC(=O)[C@@H]4C[C@@H](O)[C@@H](O)C[C@@]4(C)C3CC[C@]12C [d] C=C(c1ccccc1)[C@H]1OC[C@@H](NC(=O)Cc2ccccc2)[C@H](C)O1 [e] CC(C)S(=O)(=O)n1c(N)nc2ccc(/C(=C/C(N)=O)c3cc(F)c(F)c(F)c3)cc21 Answer: d
Propylparaben
CCCOC(=O)c1ccc(O)cc1
-4.39
test
CCCOC(=O)c1ccc(O)cc1
[C][C][C][O][C][=Branch1][C][=O][C][=C][C][=C][Branch1][C][O][C][=C][Ring1][#Branch1]
QELSKZZBTMNZEB-UHFFFAOYSA-N
propyl4-hydroxycyclohexa-1,3,5-triene-1-carboxylate
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a, b, c, d, or e without using any other words. Options: a.) Cn1nnnc1-c1cccc(NC(=O)N[C@@H]2CCCC[C@H]2CN2CCC[C@@H](Cc3ccc(F)cc3)C2)c1 b.) O=C(CS)NCCCCCC(=O)Nc1cccc2cccnc12 c.) CCCOC(=O)c1ccc(O)cc1 d.) N=C(N)c1cccc(CC(CC(=O)N2CCNCC2)NS(=O)(=O)c2ccc3ccccc3c2)c1 e.) Nc1nc(=O)c2ncn(COC(CO)CO)c2[nH]1 Answer: c
N-Acetylglycine Phenethylamide (7)
CC(=O)NCC(=O)NCCc1ccccc1
-4.659778
test
CC(=O)NCC(=O)NCCc1ccccc1
[C][C][=Branch1][C][=O][N][C][C][=Branch1][C][=O][N][C][C][C][=C][C][=C][C][=C][Ring1][=Branch1]
BZJOLOZPKTYROY-UHFFFAOYSA-N
2-acetamido-N-(2-phenylethyl)acetamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a, b, or c without using any additional words. Options: a CC(=O)NCC(=O)NCCc1ccccc1 b COCCCOc1ccc(-c2nccc(-c3cc4c([nH]3)C3(CCCNC3)CNC4=O)n2)cn1 c Cn1c(N2CCN(CCCN3c4ccccc4Sc4ccc(C(=O)O)cc43)CC2)cc(=O)n(C)c1=O Answer: a
N-Acetyl-D-leucine Phenethylamide (10)
CC(=O)N[C@H](CC(C)C)C(=O)NCCc1ccccc1
-4.513246
test
CC(=O)N[C@H](CC(C)C)C(=O)NCCc1ccccc1
[C][C][=Branch1][C][=O][N][C@H1][Branch1][#Branch1][C][C][Branch1][C][C][C][C][=Branch1][C][=O][N][C][C][C][=C][C][=C][C][=C][Ring1][=Branch1]
UQRRAVPPYXIXRC-OAHLLOKOSA-N
(2R)-2-acetamido-4-methyl-N-(2-phenylethyl)pentanamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a, b, c, d, or e without using any additional words. Options: a CC(=O)N[C@H](CC(C)C)C(=O)NCCc1ccccc1 b N=C(N)c1cccc(CC(CC(=O)N2CCCC(C(=O)O)C2)NS(=O)(=O)c2ccc3ccccc3c2)c1 c COC(=O)c1c(F)cc(Cl)cc1-c1ccc([C@@H](C)NC(=O)C2(NC(=O)C(F)(F)F)CC2)c(F)c1 d CN1C(=O)CC(N2CCN(CC/C=C3/c4ccccc4COc4ccc(C(=O)O)cc43)CC2)N(C)C1=O e CN(C)CCOC(c1ccccc1)c1ccccc1 Answer: a
30d
O=C(NC1(C(=O)N[C@H](Cc2ccccc2)C(=O)NCC2CCN(C3CCOCC3)CC2)CCCC1)c1cc2ccccc2s1
-5.79794
test
O=C(NC1(C(=O)N[C@H](Cc2ccccc2)C(=O)NCC2CCN(C3CCOCC3)CC2)CCCC1)c1cc2ccccc2s1
[O][=C][Branch2][Branch1][=Branch1][N][C][Branch2][Ring2][#Branch2][C][=Branch1][C][=O][N][C@H1][Branch1][#Branch2][C][C][=C][C][=C][C][=C][Ring1][=Branch1][C][=Branch1][C][=O][N][C][C][C][C][N][Branch1][=Branch2][C][C][C][O][C][C][Ring1][=Branch1][C][C][Ring1][N][C][C][C][C][Ring2][Ring1][S][C][=C][C][=C][C][=C][C][=C][Ring1][=Branch1][S][Ring1][=Branch2]
QBTIOECDQQPIDD-GDLZYMKVSA-N
N-[1-[[(2R)-1-[[1-(oxan-4-yl)piperidin-4-yl]methylamino]-1-oxo-3-phenylpropan-2-yl]carbamoyl]cyclopentyl]-1-benzothiophene-2-carboxamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a, b, c, or d without using any other words. Options: a. O=C(NC1(C(=O)N[C@H](Cc2ccccc2)C(=O)NCC2CCN(C3CCOCC3)CC2)CCCC1)c1cc2ccccc2s1 b. CC(C)C[C@H](O)[C@H](O)[C@H](CC1CCCCC1)NC(=O)OC(C)(C)C c. C[C@@H](O)[C@@H]1NC(=O)[C@H](CCCCN)N(C)C(=O)[C@@H](Cc2c[nH]c3ccccc23)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@@H]2CCCN2C(=O)[C@H](Cc2ccccc2)N(C)C1=O d. CC(=O)NCC(=O)N[C@@H](CCCCN)C(=O)N[C@@H](C)C(N)=O Answer: a
32b
COc1ccc2c(O[C@@H]3C[C@H]4C(=O)N[C@]5(C(=O)NS(=O)(=O)C6CC6)C[C@H]5/C=C\CCCCN(C)C(=O)[C@@H]4C3)cc(-c3nc(C(C)C)cs3)nc2c1
-4.888028
test
COc1ccc2c(O[C@@H]3C[C@H]4C(=O)N[C@]5(C(=O)NS(=O)(=O)C6CC6)C[C@H]5/C=C\CCCCN(C)C(=O)[C@@H]4C3)cc(-c3nc(C(C)C)cs3)nc2c1
[C][O][C][=C][C][=C][C][Branch2][Branch1][=Branch2][O][C@@H1][C][C@H1][C][=Branch1][C][=O][N][C@][Branch2][Ring1][C][C][=Branch1][C][=O][N][S][=Branch1][C][=O][=Branch1][C][=O][C][C][C][Ring1][Ring1][C][C@H1][Ring1][N][/C][=C][\C][C][C][C][N][Branch1][C][C][C][=Branch1][C][=O][C@@H1][Ring2][Ring1][O][C][Ring2][Ring1][=C][=C][C][Branch1][#C][C][=N][C][Branch1][=Branch1][C][Branch1][C][C][C][=C][S][Ring1][Branch2][=N][C][Ring2][Ring2][=N][=C][Ring2][Ring2][P]
SQRWDJFVRRUGCD-PEYMYBIGSA-N
(1R,4R,6S,7Z,15R,17R)-N-cyclopropylsulfonyl-17-[7-methoxy-2-(4-propan-2-yl-1,3-thiazol-2-yl)quinolin-4-yl]oxy-13-methyl-2,14-dioxo-3,13-diazatricyclo[13.3.0.04,6]octadec-7-ene-4-carboxamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a, b, c, or d without using any other words. Options: a. CC[C@H](C)C(=O)O[C@H]1C[C@H](O)C=C2C=C[C@H](C)[C@H](CC[C@@H](O)C[C@@H](O)CC(=O)O)[C@H]21 b. COc1ccc2c(O[C@@H]3C[C@H]4C(=O)N[C@]5(C(=O)NS(=O)(=O)C6CC6)C[C@H]5/C=C\CCCCN(C)C(=O)[C@@H]4C3)cc(-c3nc(C(C)C)cs3)nc2c1 c. c1csc([C@]23CNC[C@H]2C3)c1 d. CC(C)S(=O)(=O)n1c(N)nc2ccc(/C(=C/C(N)=O)c3c(F)c(F)c(F)c(F)c3F)cc21 Answer: b
cyclo[Trp-Ala-Gly-Gly-Asp-Ala]
CC1NC(=O)C(CC(=O)O)NC(=O)CNC(=O)CNC(=O)C(C)NC(=O)C(Cc2c[nH]c3ccccc23)NC1=O
-7.030758
test
CC1NC(=O)C(CC(=O)O)NC(=O)CNC(=O)CNC(=O)C(C)NC(=O)C(Cc2c[nH]c3ccccc23)NC1=O
[C][C][N][C][=Branch1][C][=O][C][Branch1][#Branch1][C][C][=Branch1][C][=O][O][N][C][=Branch1][C][=O][C][N][C][=Branch1][C][=O][C][N][C][=Branch1][C][=O][C][Branch1][C][C][N][C][=Branch1][C][=O][C][Branch1][#C][C][C][=C][NH1][C][=C][C][=C][C][=C][Ring1][=Branch2][Ring1][=Branch1][N][C][Ring2][Ring2][=Branch1][=O]
ROCLNPMDNXXUSB-UHFFFAOYSA-N
2-[8-(1H-indol-3-ylmethyl)-5,11-dimethyl-3,6,9,12,15,18-hexaoxo-1,4,7,10,13,16-hexazacyclooctadec-2-yl]aceticacid
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a, b, c, or d without using any additional words. Options: a.) Cc1ccc2cc(C(=O)NC3(C(=O)N[C@H](Cc4ccccc4)C(=O)NCC4CCN(CC5CCOCC5)CC4)CCCC3)sc2c1 b.) CC1NC(=O)C(CC(=O)O)NC(=O)CNC(=O)CNC(=O)C(C)NC(=O)C(Cc2c[nH]c3ccccc23)NC1=O c.) C#CC#CC/C=C\CCCCCC(C)=O d.) COc1cccc(-n2c(=O)n(Cc3ccccc3C#N)c(=O)n(C[C@H](N)c3ccccc3)c2=O)c1F Answer: b
22
Cc1ccc(NC(=O)c2nscc2NCc2ccncc2)cc1C(F)(F)F
-5.229574
test
Cc1ccc(NC(=O)c2nscc2NCc2ccncc2)cc1C(F)(F)F
[C][C][=C][C][=C][Branch2][Ring1][#Branch1][N][C][=Branch1][C][=O][C][=N][S][C][=C][Ring1][Branch1][N][C][C][=C][C][=N][C][=C][Ring1][=Branch1][C][=C][Ring2][Ring1][=Branch1][C][Branch1][C][F][Branch1][C][F][F]
RSGWIQGBPJPOEK-UHFFFAOYSA-N
N-[4-methyl-3-(trifluoromethyl)phenyl]-4-(pyridin-4-ylmethylamino)-1,2-thiazole-3-carboxamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a, b, c, or d without using any other words. Options: a COc1ccc2c(=O)cc(-c3ccccc3)oc2c1 b CC(C)CC[C@@H](O)[C@](C)(O)[C@H]1CC[C@@]2(O)C3=CC(=O)[C@]4(O)C[C@@H](O)[C@@H](O)C[C@@]4(C)C3[C@@H](O)C[C@]12C c CC(=O)N[C@@H](C(=O)NCCc1ccccc1)C(C)C d Cc1ccc(NC(=O)c2nscc2NCc2ccncc2)cc1C(F)(F)F Answer: d
5-chlorosalicylic acid
O=C(O)c1cc(Cl)ccc1O
-4.98
test
O=C(O)c1cc(Cl)ccc1O
[O][=C][Branch1][C][O][C][=C][C][Branch1][C][Cl][=C][C][=C][Ring1][#Branch1][O]
NKBASRXWGAGQDP-UHFFFAOYSA-N
5-chloro-2-hydroxybenzoicacid
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a, b, c, or d without using any additional words. Options: a. O=C(O)c1cc(Cl)ccc1O b. CC(C)[C@@H](C(=O)N[C@H](C)Cc1ccc(O)c(C(C)(C)C)c1)N(C)C(=O)[C@@H](N)Cc1ccccc1 c. COc1ccc(-c2oc3c(CC=C(C)C)c(O[C@@H]4O[C@H](CO)[C@@H](O)[C@H](O)[C@H]4O)cc(O)c3c(=O)c2O[C@H]2O[C@H](C)[C@@H](O)[C@H](O)[C@@H]2O)cc1 d. COC(=O)C(C)NP(=O)(OC[C@@H]1C=C[C@H](n2cc(C)c(=O)[nH]c2=O)O1)Oc1ccc(Br)cc1 Answer: a
(-)-epicatechin
Oc1cc(O)c2c(c1)OC(c1ccc(O)c(O)c1)C(O)C2
-6.22
test
Oc1cc(O)c2c(c1)OC(c1ccc(O)c(O)c1)C(O)C2
[O][C][=C][C][Branch1][C][O][=C][C][=Branch1][Ring2][=C][Ring1][#Branch1][O][C][Branch1][#C][C][=C][C][=C][Branch1][C][O][C][Branch1][C][O][=C][Ring1][Branch2][C][Branch1][C][O][C][Ring1][S]
PFTAWBLQPZVEMU-UHFFFAOYSA-N
2-(3,4-dihydroxycyclohexa-1,3,5-trien-1-yl)-3,4-dihydro-2H-chromene-3,5,7-triol
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a or b without using any other words. Options: a) Oc1cc(O)c2c(c1)OC(c1ccc(O)c(O)c1)C(O)C2 b) CN1C2CC[C@@H]1CC(OC(c1ccccc1)c1ccc(Cl)cc1)C2 Answer: a
dexamethasone b D glucuronide
C[C@@H]1C[C@H]2[C@@H]3CCC4=CC(=O)C=C[C@]4(C)[C@@]3(F)[C@@H](O)C[C@]2(C)[C@@]1(O)C(=O)CO[C@H]1O[C@@H](C(=O)O)[C@H](O)[C@@H](O)[C@@H]1O
-6.12
test
C[C@@H]1C[C@H]2[C@@H]3CCC4=CC(=O)C=C[C@]4(C)[C@@]3(F)[C@@H](O)C[C@]2(C)[C@@]1(O)C(=O)CO[C@H]1O[C@@H](C(=O)O)[C@H](O)[C@@H](O)[C@@H]1O
[C][C@@H1][C][C@H1][C@@H1][C][C][C][=C][C][=Branch1][C][=O][C][=C][C@][Ring1][#Branch1][Branch1][C][C][C@@][Ring1][N][Branch1][C][F][C@@H1][Branch1][C][O][C][C@][Ring2][Ring1][C][Branch1][C][C][C@@][Ring2][Ring1][=Branch1][Branch1][C][O][C][=Branch1][C][=O][C][O][C@H1][O][C@@H1][Branch1][=Branch1][C][=Branch1][C][=O][O][C@H1][Branch1][C][O][C@@H1][Branch1][C][O][C@@H1][Ring1][O][O]
UBHXMSIBGRGDSX-DCSHZXMSSA-N
(2R,3R,4R,5S,6S)-6-[2-[(8S,9R,10S,11S,13S,14S,16R,17R)-9-fluoro-11,17-dihydroxy-10,13,16-trimethyl-3-oxo-6,7,8,11,12,14,15,16-octahydrocyclopenta[a]phenanthren-17-yl]-2-oxoethoxy]-3,4,5-trihydroxyoxane-2-carboxylic acid
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a, b, c, or d without using any additional words. Options: (a) Nc1ccncc1 (b) N=C(N)c1cccc(CC(CC(=O)N2CCC(C(=O)O)CC2)NS(=O)(=O)c2ccc3ccccc3c2)c1 (c) C=C[C@H]1CN2CC[C@H]1C[C@@H]2C(O)c1ccnc2ccc(OC)cc12 (d) C[C@@H]1C[C@H]2[C@@H]3CCC4=CC(=O)C=C[C@]4(C)[C@@]3(F)[C@@H](O)C[C@]2(C)[C@@]1(O)C(=O)CO[C@H]1O[C@@H](C(=O)O)[C@H](O)[C@@H](O)[C@@H]1O Answer: d
glycine-valine acyclovir
CC(=O)C(NC(=O)CN)c1ccc(O)cc1
-5.28
test
CC(=O)C(NC(=O)CN)c1ccc(O)cc1
[C][C][=Branch1][C][=O][C][Branch1][Branch2][N][C][=Branch1][C][=O][C][N][C][=C][C][=C][Branch1][C][O][C][=C][Ring1][#Branch1]
MMNYDRYPRMBCRF-UHFFFAOYSA-N
2-azanyl-N-[1-(4-hydroxyphenyl)-2-oxidanylidene-propyl]ethanamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a, b, c, d, or e without using any additional words. Options: a. CC(C(=O)O)c1ccc2c(c1)Cc1cccnc1O2 b. O=c1[nH]c(=O)n([C@H]2O[C@@H](CO)[C@H](O)[C@H]2O)cc1/C=C/Br c. CC(C)C(NC(=O)[C@@H]1CCCN1C(=O)[C@@H](NC(=O)N1CCOCC1)C(C)C)C(=O)C(F)(F)C(F)(F)F d. CC(=O)C(NC(=O)CN)c1ccc(O)cc1 e. Cn1c(N2CCCN(CCCN3c4ccccc4Sc4ccc(CC(=O)O)cc43)CC2)cc(=O)n(C)c1=O Answer: d
guanabenz
NC(N)=N/N=C/c1c(Cl)cccc1Cl
-4.68
test
NC(N)=N/N=C/c1c(Cl)cccc1Cl
[N][C][Branch1][C][N][=N][/N][=C][/C][=C][Branch1][C][Cl][C][=C][C][=C][Ring1][#Branch1][Cl]
WDZVGELJXXEGPV-YIXHJXPBSA-N
2-[(E)-(2,6-dichlorophenyl)methylideneamino]guanidine
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a or b without using any additional words. Options: a.) COc1ccc2c(=O)cc(-c3ccccc3)oc2c1 b.) NC(N)=N/N=C/c1c(Cl)cccc1Cl Answer: b
acetaminophen
CC(=O)Nc1ccc(O)cc1
-4.44
test
CC(=O)Nc1ccc(O)cc1
[C][C][=Branch1][C][=O][N][C][=C][C][=C][Branch1][C][O][C][=C][Ring1][#Branch1]
RZVAJINKPMORJF-UHFFFAOYSA-N
N-(4-hydroxycyclohexa-1,3,5-trien-1-yl)acetamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a, b, or c without using any additional words. Options: [a] CC(=O)Nc1ccc(O)cc1 [b] Cc1nccc2c1[nH]c1ccccc12 [c] O=C(CS)NCCCCCC(=O)Nc1cccc2cccnc12 Answer: a
lisinopril
NCCCC[C@H](N[C@@H](CCc1ccccc1)C(=O)O)C(=O)N1CCC[C@H]1C(=O)O
-7.39
test
NCCCC[C@H](N[C@@H](CCc1ccccc1)C(=O)O)C(=O)N1CCC[C@H]1C(=O)O
[N][C][C][C][C][C@H1][Branch2][Ring1][Ring2][N][C@@H1][Branch1][O][C][C][C][=C][C][=C][C][=C][Ring1][=Branch1][C][=Branch1][C][=O][O][C][=Branch1][C][=O][N][C][C][C][C@H1][Ring1][Branch1][C][=Branch1][C][=O][O]
RLAWWYSOJDYHDC-BZSNNMDCSA-N
(2S)-1-[(2S)-6-amino-2-[[(1S)-1-carboxy-3-phenylpropyl]amino]hexanoyl]pyrrolidine-2-carboxylic acid
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a, b, or c without using any other words. Options: a CN(C)CCCN1c2ccccc2Sc2ccccc21 b CN1C(=O)CC(N2CCN(CC/C=C3/c4ccccc4COc4ccc(C(=O)O)cc43)CC2)N(C)C1=O c NCCCC[C@H](N[C@@H](CCc1ccccc1)C(=O)O)C(=O)N1CCC[C@H]1C(=O)O Answer: c
naproxen
COc1ccc2cc([C@H](C)C(=O)O)ccc2c1
-4.66
test
COc1ccc2cc([C@H](C)C(=O)O)ccc2c1
[C][O][C][=C][C][=C][C][=C][Branch1][#Branch2][C@H1][Branch1][C][C][C][=Branch1][C][=O][O][C][=C][C][Ring1][O][=C][Ring1][#C]
CMWTZPSULFXXJA-VIFPVBQESA-N
(2S)-2-(6-methoxynaphthalen-2-yl)propanoic acid
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a, b, c, or d without using any other words. Options: a) C[C@@H](O)[C@@H]1NC(=O)[C@H](CCCCN)NC(=O)[C@@H](Cc2c[nH]c3ccccc23)N(C)C(=O)[C@H](Cc2ccccc2)NC(=O)[C@@H]2CCCN2C(=O)[C@H](Cc2ccccc2)NC1=O b) COc1ccc2cc([C@H](C)C(=O)O)ccc2c1 c) CC1(C)S[C@@H]2[C@H](NC(=O)Cc3ccccc3)C(=O)N2[C@H]1C(=O)O d) c1ccc(-c2ccncc2)cc1 Answer: b
naproxen sodium
COc1ccc2cc(C(C)C(=O)[O-])ccc2c1.[Na+]
-4.33
test
COc1ccc2cc(C(C)C(=O)[O-])ccc2c1.[Na+]
[C][O][C][=C][C][=C][C][=C][Branch1][#Branch2][C][Branch1][C][C][C][=Branch1][C][=O][O-1][C][=C][C][Ring1][O][=C][Ring1][#C].[Na+1]
CDBRNDSHEYLDJV-UHFFFAOYSA-M
sodium;2-(6-methoxynaphthalen-2-yl)propanoate
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a, b, or c without using any additional words. Options: a COc1ccc2cc(C(C)C(=O)[O-])ccc2c1.[Na+] b CC1(C)S[C@]2(C)[C@H](NC(=O)[C@H](N)c3ccccc3)C(=O)N2[C@H]1C(=O)O c CCOC(=O)c1ccc2c(C(C(=O)NS(=O)(=O)c3ccc(C)cc3OC)c3ccc4c(c3)OCO4)cn(C)c2c1 Answer: a
N-carbobenzoxy-tryptophan
O=C(NC(Cc1c[nH]c2ccccc12)C(=O)O)OCc1ccccc1
-5.8
test
O=C(NC(Cc1c[nH]c2ccccc12)C(=O)O)OCc1ccccc1
[O][=C][Branch2][Ring1][Branch2][N][C][Branch1][#C][C][C][=C][NH1][C][=C][C][=C][C][=C][Ring1][=Branch2][Ring1][=Branch1][C][=Branch1][C][=O][O][O][C][C][=C][C][=C][C][=C][Ring1][=Branch1]
AHYFYYVVAXRMKB-UHFFFAOYSA-N
3-(1H-indol-3-yl)-2-(phenylmethoxycarbonylamino)propanoic acid
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a or b without using any other words. Options: [a] NCCCC[C@H](N[C@@H](CCc1ccccc1)C(=O)O)C(=O)N1CCC[C@@H]1C(=O)O [b] O=C(NC(Cc1c[nH]c2ccccc12)C(=O)O)OCc1ccccc1 Answer: b
sulfasalazine
O=C(O)c1cc(/N=N/c2ccc(S(=O)(=O)Nc3ccccn3)cc2)ccc1O
-5.378171
test
O=C(O)c1cc(/N=N/c2ccc(S(=O)(=O)Nc3ccccn3)cc2)ccc1O
[O][=C][Branch1][C][O][C][=C][C][Branch2][Ring1][=N][/N][=N][/C][=C][C][=C][Branch1][P][S][=Branch1][C][=O][=Branch1][C][=O][N][C][=C][C][=C][C][=N][Ring1][=Branch1][C][=C][Ring1][S][=C][C][=C][Ring2][Ring1][Branch2][O]
NCEXYHBECQHGNR-QZQOTICOSA-N
2-oxidanyl-5-[(E)-[4-(pyridin-2-ylsulfamoyl)phenyl]diazenyl]benzoicacid
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a, b, c, or d without using any additional words. Options: [a] O=c1ccc2ccc(O)cc2o1 [b] COC(=O)C(C)NP(=O)(OC[C@@H]1C=C[C@H](n2cc(C)c(=O)[nH]c2=O)O1)Oc1ccc(OC)cc1 [c] O=C(O)c1cc(/N=N/c2ccc(S(=O)(=O)Nc3ccccn3)cc2)ccc1O [d] C=CCc1cc(OC)c(OC(C)C(O)c2cc(O)cc(OC)c2)c(OC)c1 Answer: c
benzoic acid
O=C(O)c1ccccc1
-4.005
test
O=C(O)c1ccccc1
[O][=C][Branch1][C][O][C][=C][C][=C][C][=C][Ring1][=Branch1]
WPYMKLBDIGXBTP-UHFFFAOYSA-N
benzoicacid
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a, b, or c without using any other words. Options: a.) O=C(O)c1ccccc1 b.) Cn1c(N2CCN(CCCN3c4ccccc4Sc4ccc(C(=O)O)cc43)CC2)cc(=O)n(C)c1=O c.) O=C(/C=C/c1ccc(O)cc1)c1ccc(O)cc1O Answer: a
cephalexin
CC1=C(C(=O)O)N2C(=O)C(NC(=O)C(N)c3ccccc3)C2SC1
-6.36
test
CC1=C(C(=O)O)N2C(=O)C(NC(=O)C(N)c3ccccc3)C2SC1
[C][C][=C][Branch1][=Branch1][C][=Branch1][C][=O][O][N][C][=Branch1][C][=O][C][Branch2][Ring1][C][N][C][=Branch1][C][=O][C][Branch1][C][N][C][=C][C][=C][C][=C][Ring1][=Branch1][C][Ring1][S][S][C][Ring2][Ring1][#Branch1]
ZAIPMKNFIOOWCQ-UHFFFAOYSA-N
7-[(2-amino-2-phenylacetyl)amino]-3-methyl-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a or b without using any additional words. Options: a: CC1=C(C(=O)O)N2C(=O)C(NC(=O)C(N)c3ccccc3)C2SC1 b: O=C(CO)N1CCN(c2ccc(N3C[C@H](CNC(=S)C4CC4)OC3=O)cc2F)CC1 Answer: a
cephalexin acetylated
CC(=O)NC(C(=O)NC1C(=O)N2C(C(=O)O)=C(C)CSC12)c1ccccc1
-6.63
test
CC(=O)NC(C(=O)NC1C(=O)N2C(C(=O)O)=C(C)CSC12)c1ccccc1
[C][C][=Branch1][C][=O][N][C][Branch2][Ring1][#C][C][=Branch1][C][=O][N][C][C][=Branch1][C][=O][N][C][Branch1][=Branch1][C][=Branch1][C][=O][O][=C][Branch1][C][C][C][S][C][Ring1][=N][Ring1][#Branch2][C][=C][C][=C][C][=C][Ring1][=Branch1]
KTXQFHYQZFMPJG-UHFFFAOYSA-N
7-[(2-acetamido-2-phenyl-ethanoyl)amino]-3-methyl-8-oxidanylidene-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylicacid
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a or b without using any other words. Options: [a] N=C(N)c1ccc2[nH]c(Cc3nc4ccccc4[nH]3)nc2c1 [b] CC(=O)NC(C(=O)NC1C(=O)N2C(C(=O)O)=C(C)CSC12)c1ccccc1 Answer: b
7
CNS(=O)(=O)c1ccc(Cl)cc1
-4.186419
test
CNS(=O)(=O)c1ccc(Cl)cc1
[C][N][S][=Branch1][C][=O][=Branch1][C][=O][C][=C][C][=C][Branch1][C][Cl][C][=C][Ring1][#Branch1]
PJHYEBDREIJPKX-UHFFFAOYSA-N
4-chloro-N-methylbenzenesulfonamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a, b, c, or d without using any other words. Options: a CC(=O)c1ccc2c(c1)N1C(=O)OCC1CC2 b COCCn1cc(C(C(=O)NS(=O)(=O)c2ccc(C)cc2OC)c2ccc3c(c2)OCO3)c2ccc(F)cc21 c CNS(=O)(=O)c1ccc(Cl)cc1 d CCCCC/C=C\C/C=C\CCCCCCCC(=O)OCC/C=C/c1ccc(OC)c(OC)c1 Answer: c
Metoprolol
COCCc1ccc(OCC(O)CNC(C)C)cc1
-4.349301
test
COCCc1ccc(OCC(O)CNC(C)C)cc1
[C][O][C][C][C][=C][C][=C][Branch1][=C][O][C][C][Branch1][C][O][C][N][C][Branch1][C][C][C][C][=C][Ring1][#C]
IUBSYMUCCVWXPE-UHFFFAOYSA-N
1-[4-(2-methoxyethyl)cyclohexa-1,3,5-trien-1-yl]oxy-3-(propan-2-ylamino)propan-2-ol
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a, b, c, or d without using any additional words. Options: a. CO/N=C(\C(=O)N[C@@H]1C(=O)N2C(C(=O)O)=C(CSc3nc(=O)c(=O)[nH]n3C)CS[C@H]12)c1csc(N)n1 b. COCCc1ccc(OCC(O)CNC(C)C)cc1 c. C[C@@H]1O[C@@H](c2ccc(N(O)O)cc2)OC[C@H]1NC(=O)Cc1ccccc1 d. CCOC(=O)COc1ccc(C(=O)CN2CCN(C3CCN(C(=O)OCOC(=O)C(C)(C)C)CC3)CC2=O)cc1 Answer: b
2h
CCOC(=O)c1c(Cl)cc(Cl)cc1-c1ccc([C@@H](C)NC(=O)C2(NC(=O)C(F)(F)F)CC2)c(F)c1
-4.60206
test
CCOC(=O)c1c(Cl)cc(Cl)cc1-c1ccc([C@@H](C)NC(=O)C2(NC(=O)C(F)(F)F)CC2)c(F)c1
[C][C][O][C][=Branch1][C][=O][C][=C][Branch1][C][Cl][C][=C][Branch1][C][Cl][C][=C][Ring1][Branch2][C][=C][C][=C][Branch2][Ring1][=C][C@@H1][Branch1][C][C][N][C][=Branch1][C][=O][C][Branch1][=C][N][C][=Branch1][C][=O][C][Branch1][C][F][Branch1][C][F][F][C][C][Ring1][#Branch2][C][Branch1][C][F][=C][Ring2][Ring1][=Branch1]
NDUITOJEZKAZBB-LLVKDONJSA-N
ethyl 2,4-dichloro-6-[3-fluoro-4-[(1R)-1-[[1-[(2,2,2-trifluoroacetyl)amino]cyclopropanecarbonyl]amino]ethyl]phenyl]benzoate
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a or b without using any other words. Options: a.) CCOC(=O)c1c(Cl)cc(Cl)cc1-c1ccc([C@@H](C)NC(=O)C2(NC(=O)C(F)(F)F)CC2)c(F)c1 b.) CC(C)C[C@H]1NC(=O)[C@@H](CC2CCCCC2)NC(=O)CNC(=O)[C@@H](C)NC(=O)[C@H](Cc2ccc(O)cc2)NC(=O)/C=C\c2ccccc2OC1=O Answer: a
1
COC(=O)c1c(Cl)cccc1-c1ccc([C@@H](C)NC(=O)C2(NC(=O)C(F)(F)F)CC2)c(F)c1
-4.468521
test
COC(=O)c1c(Cl)cccc1-c1ccc([C@@H](C)NC(=O)C2(NC(=O)C(F)(F)F)CC2)c(F)c1
[C][O][C][=Branch1][C][=O][C][=C][Branch1][C][Cl][C][=C][C][=C][Ring1][#Branch1][C][=C][C][=C][Branch2][Ring1][=C][C@@H1][Branch1][C][C][N][C][=Branch1][C][=O][C][Branch1][=C][N][C][=Branch1][C][=O][C][Branch1][C][F][Branch1][C][F][F][C][C][Ring1][#Branch2][C][Branch1][C][F][=C][Ring2][Ring1][=Branch1]
WZZIQHIQMWJNLU-LLVKDONJSA-N
methyl 2-chloro-6-[3-fluoro-4-[(1R)-1-[[1-[(2,2,2-trifluoroacetyl)amino]cyclopropanecarbonyl]amino]ethyl]phenyl]benzoate
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a or b without using any other words. Options: a: CCOC(=O)c1ccc(O)cc1 b: COC(=O)c1c(Cl)cccc1-c1ccc([C@@H](C)NC(=O)C2(NC(=O)C(F)(F)F)CC2)c(F)c1 Answer: b
883-(cis)-[2-(E-Phenylvinyl)-1,3-dioxan-5-yl]phenylacetamide (14a)
C=C(c1ccccc1)C1OCC(NC(=O)Cc2ccccc2)CO1
-5.049879
test
C=C(c1ccccc1)C1OCC(NC(=O)Cc2ccccc2)CO1
[C][=C][Branch1][=Branch2][C][=C][C][=C][C][=C][Ring1][=Branch1][C][O][C][C][Branch1][#C][N][C][=Branch1][C][=O][C][C][=C][C][=C][C][=C][Ring1][=Branch1][C][O][Ring1][S]
MXBNEZNLOFMGED-UHFFFAOYSA-N
2-phenyl-N-[2-(1-phenylethenyl)-1,3-dioxan-5-yl]ethanamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a, b, c, d, or e without using any other words. Options: a.) Nc1nc(O)c2ncn([C@@H]3C[C@H](CO)[C@H]3CO)c2n1 b.) C[C@@H](O)[C@@H]1NC(=O)[C@H](CCCCN)NC(=O)[C@@H](Cc2c[nH]c3ccccc23)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@@H]2CCCN2C(=O)[C@H](Cc2ccccc2)N(C)C1=O c.) CCC(C)C(=O)O[C@@H]1C[C@@H](O)C=C2C=C[C@@H](C)[C@@H](CC[C@@H](O)C[C@@H](O)CC(=O)O)[C@@H]21 d.) C=C(c1ccccc1)C1OCC(NC(=O)Cc2ccccc2)CO1 e.) Nc1cc(-c2ccncc2)c[nH]c1=O Answer: d
107-zidovudine
Cc1cn([C@H]2C[C@H]([N-][NH+]=N)[C@@H](CO)O2)c(=O)[nH]c1=O
-5.185087
test
Cc1cn([C@H]2C[C@H]([N-][NH+]=N)[C@@H](CO)O2)c(=O)[nH]c1=O
[C][C][=C][N][Branch1][P][C@H1][C][C@H1][Branch1][Ring2][N-1][NH1+1][=N][C@@H1][Branch1][Ring1][C][O][O][Ring1][#Branch2][C][=Branch1][C][=O][NH1][C][Ring1][P][=O]
IHOBRAYMCPRMCF-XLPZGREQSA-N
[(2S,3S,5R)-2-(hydroxymethyl)-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-3-yl]-iminoazaniumylazanide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a or b without using any other words. Options: a: CCc1cc(C(N)=S)ccn1 b: Cc1cn([C@H]2C[C@H]([N-][NH+]=N)[C@@H](CO)O2)c(=O)[nH]c1=O Answer: b
174-Guanabenz
NC(N)=N/N=C/c1c(Cl)cccc1Cl
-4.363412
test
NC(N)=N/N=C/c1c(Cl)cccc1Cl
[N][C][Branch1][C][N][=N][/N][=C][/C][=C][Branch1][C][Cl][C][=C][C][=C][Ring1][#Branch1][Cl]
WDZVGELJXXEGPV-YIXHJXPBSA-N
2-[(E)-(2,6-dichlorophenyl)methylideneamino]guanidine
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a or b without using any other words. Options: a.) NC(=O)C(N)Cc1c[nH]c2ccccc12 b.) NC(N)=N/N=C/c1c(Cl)cccc1Cl Answer: b
205-Fluoxetine
CNCCC(Oc1ccc(C(F)(F)F)cc1)c1ccccc1
-4.929962
test
CNCCC(Oc1ccc(C(F)(F)F)cc1)c1ccccc1
[C][N][C][C][C][Branch2][Ring1][Ring2][O][C][=C][C][=C][Branch1][=Branch2][C][Branch1][C][F][Branch1][C][F][F][C][=C][Ring1][#Branch2][C][=C][C][=C][C][=C][Ring1][=Branch1]
RTHCYVBBDHJXIQ-UHFFFAOYSA-N
N-methyl-3-phenyl-3-[4-(trifluoromethyl)phenoxy]propan-1-amine
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a, b, c, or d without using any other words. Options: a: CNCCC(Oc1ccc(C(F)(F)F)cc1)c1ccccc1 b: CCCCC(C)OC(=O)COc1ccc(C(=O)CN2CCN(C3CCNCC3)CC2=O)cc1 c: CN1CCCC/C=C\[C@@H]2C[C@@]2(C(=O)NS(=O)(=O)C2CC2)NC(=O)[C@@H]2C[C@@H](Oc3nc(-c4ccccc4)nc4ccccc34)C[C@H]2C1=O d: COc1cc(-c2oc3cc(O)cc(O)c3c(=O)c2O[C@@H]2O[C@H](CO[C@@H]3O[C@@H](C)[C@H](O)[C@@H](O)[C@H]3O)[C@@H](O)[C@H](O)[C@H]2O)ccc1O Answer: a
285-Ephedrine
CN[C@@H](C)[C@@H](O)c1ccccc1
-4.9914
test
CN[C@@H](C)[C@@H](O)c1ccccc1
[C][N][C@@H1][Branch1][C][C][C@@H1][Branch1][C][O][C][=C][C][=C][C][=C][Ring1][=Branch1]
KWGRBVOPPLSCSI-WCBMZHEXSA-N
(1S,2S)-2-(methylamino)-1-phenylpropan-1-ol
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a or b without using any additional words. Options: [a] CN[C@@H](C)[C@@H](O)c1ccccc1 [b] COc1ccc(CC2c3cc(OC)c(OC)cc3CCN2C)cc1OC Answer: a
403-Atorvastatin
CC(C)c1c(C(=O)Nc2ccccc2)c(-c2ccccc2)c(-c2ccc(F)cc2)n1CC[C@H](O)C[C@H](O)CC(=O)O
-5.309804
test
CC(C)c1c(C(=O)Nc2ccccc2)c(-c2ccccc2)c(-c2ccc(F)cc2)n1CC[C@H](O)C[C@H](O)CC(=O)O
[C][C][Branch1][C][C][C][=C][Branch1][=C][C][=Branch1][C][=O][N][C][=C][C][=C][C][=C][Ring1][=Branch1][C][Branch1][=Branch2][C][=C][C][=C][C][=C][Ring1][=Branch1][=C][Branch1][N][C][=C][C][=C][Branch1][C][F][C][=C][Ring1][#Branch1][N][Ring2][Ring1][O][C][C][C@H1][Branch1][C][O][C][C@H1][Branch1][C][O][C][C][=Branch1][C][=O][O]
XUKUURHRXDUEBC-SVBPBHIXSA-N
(3S,5S)-7-[2-(4-fluorophenyl)-3-phenyl-4-(phenylcarbamoyl)-5-propan-2-ylpyrrol-1-yl]-3,5-dihydroxyheptanoic acid
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a, b, c, or d without using any additional words. Options: a) CCOC(=O)COc1ccc(C(=O)CN2CCN(C3CCN(C(=O)OC(OC(=O)C(C)(C)C)C(C)(C)C)CC3)CC2=O)cc1 b) Cc1nccc2c1[nH]c1cc(O)ccc12 c) C[C@@H]1O[C@@H](c2ccc(Cl)cc2)OC[C@H]1NC(=O)Cc1ccccc1 d) CC(C)c1c(C(=O)Nc2ccccc2)c(-c2ccccc2)c(-c2ccc(F)cc2)n1CC[C@H](O)C[C@H](O)CC(=O)O Answer: d
Amphetamine sulfate
C[C@H](N)Cc1ccccc1
-4.39
test
C[C@H](N)Cc1ccccc1
[C][C@H1][Branch1][C][N][C][C][=C][C][=C][C][=C][Ring1][=Branch1]
KWTSXDURSIMDCE-QMMMGPOBSA-N
(2S)-1-phenylpropan-2-amine
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a or b without using any other words. Options: a: C[C@H](N)Cc1ccccc1 b: CC(C)C[C@H]1NC(=O)[C@@H](Cc2ccccc2)NC(=O)CNC(=O)[C@@H](C)NC(=O)[C@H](Cc2ccc(O)cc2)NC(=O)/C=C\c2ccccc2OC1=O Answer: a
Artesunate
CC1CCC2C(C)C(OC(=O)CCC(=O)O)OC3OC4(C)CCC1C32OO4
-5.4
test
CC1CCC2C(C)C(OC(=O)CCC(=O)O)OC3OC4(C)CCC1C32OO4
[C][C][C][C][C][C][Branch1][C][C][C][Branch1][=N][O][C][=Branch1][C][=O][C][C][C][=Branch1][C][=O][O][O][C][O][C][Branch1][C][C][C][C][C][Ring2][Ring1][#Branch1][C][Ring1][Branch2][Ring2][Ring1][Branch1][O][O][Ring1][Branch2]
FIHJKUPKCHIPAT-UHFFFAOYSA-N
4-oxo-4-[(1,5,9-trimethyl-11,14,15,16-tetraoxatetracyclo[10.3.1.04,13.08,13]hexadecan-10-yl)oxy]butanoic acid
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a, b, or c without using any other words. Options: a: Cc1cc(O)cc(C)c1C[C@H](N)C(=O)N1CCC[C@@H]1C(=O)N[C@@H](Cc1c[nH]c2ccccc12)C(=O)N[C@@H](Cc1ccccc1)C(N)=O b: CNC(=O)[C@H](NC(=O)[C@](O)(Cc1ccccc1)CN(Cc1ccc(Br)cc1)NC(=O)[C@H](CC(=O)OC)C(C)(C)C)C(C)(C)C c: CC1CCC2C(C)C(OC(=O)CCC(=O)O)OC3OC4(C)CCC1C32OO4 Answer: c
Atorvastatin
CC(C)c1c(C(=O)Nc2ccccc2)c(-c2ccccc2)c(-c2ccc(F)cc2)n1CC[C@@H](O)C[C@@H](O)CC(=O)O
-5.31
test
CC(C)c1c(C(=O)Nc2ccccc2)c(-c2ccccc2)c(-c2ccc(F)cc2)n1CC[C@@H](O)C[C@@H](O)CC(=O)O
[C][C][Branch1][C][C][C][=C][Branch1][=C][C][=Branch1][C][=O][N][C][=C][C][=C][C][=C][Ring1][=Branch1][C][Branch1][=Branch2][C][=C][C][=C][C][=C][Ring1][=Branch1][=C][Branch1][N][C][=C][C][=C][Branch1][C][F][C][=C][Ring1][#Branch1][N][Ring2][Ring1][O][C][C][C@@H1][Branch1][C][O][C][C@@H1][Branch1][C][O][C][C][=Branch1][C][=O][O]
XUKUURHRXDUEBC-KAYWLYCHSA-N
(3R,5R)-7-[2-(4-fluorophenyl)-3-phenyl-4-(phenylcarbamoyl)-5-propan-2-ylpyrrol-1-yl]-3,5-dihydroxyheptanoic acid
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a, b, c, d, or e without using any additional words. Options: a. C#C[C@@]1(O)CC[C@@H]2[C@H]3CCC4=Cc5oncc5C[C@@]4(C)[C@@H]3CC[C@]21C b. CN(C)C(=O)OC1N=C(c2ccccc2)c2cc(Cl)ccc2N(C)C1=O c. CNC(=O)C(c1ccc2nc(N)n(C(C)C)c2c1)c1cccc(F)c1F d. CC(C)CNC(=O)[C@H](C)NC[C@H](Cc1ccccc1)NC(=O)c1cc(CCC2C[C@@H]2C)cc(N(C)S(C)(=O)=O)c1 e. CC(C)c1c(C(=O)Nc2ccccc2)c(-c2ccccc2)c(-c2ccc(F)cc2)n1CC[C@@H](O)C[C@@H](O)CC(=O)O Answer: e
Bisoprolol
CC(C)NCC(O)COc1ccc(COCCOC(C)C)cc1
-4.76
test
CC(C)NCC(O)COc1ccc(COCCOC(C)C)cc1
[C][C][Branch1][C][C][N][C][C][Branch1][C][O][C][O][C][=C][C][=C][Branch1][O][C][O][C][C][O][C][Branch1][C][C][C][C][=C][Ring1][=C]
VHYCDWMUTMEGQY-UHFFFAOYSA-N
1-(propan-2-ylamino)-3-[4-(2-propan-2-yloxyethoxymethyl)phenoxy]propan-2-ol
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a, b, c, or d without using any other words. Options: a) CC(C)NCC(O)COc1ccc(COCCOC(C)C)cc1 b) O=c1cc(-c2ccc(O)cc2)oc2cc(O)c([C@@H]3O[C@H](CO)[C@@H](O)[C@H](O)[C@H]3O)c(O)c12 c) COc1cc(C(=O)NCc2ccc(OCCN(C)C)cc2)cc(OC)c1OC d) O=C(O)Cc1ccccc1Nc1c(Cl)cccc1Cl Answer: a
Bupropion
CC(NC(C)(C)C)C(=O)c1cccc(Cl)c1
-3.951954
test
CC(NC(C)(C)C)C(=O)c1cccc(Cl)c1
[C][C][Branch1][#Branch2][N][C][Branch1][C][C][Branch1][C][C][C][C][=Branch1][C][=O][C][=C][C][=C][C][Branch1][C][Cl][=C][Ring1][#Branch1]
SNPPWIUOZRMYNY-UHFFFAOYSA-N
2-(tert-butylamino)-1-(3-chlorocyclohexa-2,4,6-trien-1-yl)propan-1-one
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a, b, or c without using any additional words. Options: a. CC(NC(C)(C)C)C(=O)c1cccc(Cl)c1 b. O=c1c(-c2ccc(O)cc2)coc2c(C3O[C@H](CO)[C@@H](O)[C@H](O)[C@H]3O)c(O)ccc12 c. CN1CCC(=C2c3ccccc3CC(=O)c3sccc32)CC1 Answer: a
Cetirizine
O=C(O)COCCN1CCN(C(c2ccccc2)c2ccc(Cl)cc2)CC1
-5.5
test
O=C(O)COCCN1CCN(C(c2ccccc2)c2ccc(Cl)cc2)CC1
[O][=C][Branch1][C][O][C][O][C][C][N][C][C][N][Branch2][Ring1][#Branch1][C][Branch1][=Branch2][C][=C][C][=C][C][=C][Ring1][=Branch1][C][=C][C][=C][Branch1][C][Cl][C][=C][Ring1][#Branch1][C][C][Ring2][Ring1][Ring2]
ZKLPARSLTMPFCP-UHFFFAOYSA-N
2-[2-[4-[(4-chlorophenyl)-phenylmethyl]piperazin-1-yl]ethoxy]aceticacid
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a, b, c, d, or e without using any additional words. Options: a CC(=O)c1ccc(N2CC(CO)OC2=O)cc1 b CNC(=O)[C@@H](Cc1ccccc1)NC(=O)[C@@H](C)NC(C)=O c CC1(C)SC2C(NC(=O)C(N)c3ccccc3)C(=O)N2C1C(=O)O d O=C(O)COCCN1CCN(C(c2ccccc2)c2ccc(Cl)cc2)CC1 e C=C(c1ccccc1)C1OCC(N)CO1 Answer: d
Chloroquine
CCN(CC)CCCC(C)Nc1ccnc2cc(Cl)ccc12
-4.55
test
CCN(CC)CCCC(C)Nc1ccnc2cc(Cl)ccc12
[C][C][N][Branch1][Ring1][C][C][C][C][C][C][Branch1][C][C][N][C][=C][C][=N][C][=C][C][Branch1][C][Cl][=C][C][=C][Ring1][O][Ring1][#Branch1]
WHTVZRBIWZFKQO-UHFFFAOYSA-N
4-N-(7-chloroquinolin-4-yl)-1-N,1-N-diethylpentane-1,4-diamine
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a or b without using any other words. Options: a) O=C(NC1(C(=O)N[C@H](Cc2ccccc2)C(=O)NCCC2CCN(CC3CCOCC3)CC2)CCCC1)c1cc2ccccc2s1 b) CCN(CC)CCCC(C)Nc1ccnc2cc(Cl)ccc12 Answer: b
Chlorzoxazone
O=c1[nH]c2cc(Cl)ccc2o1
-4.19
test
O=c1[nH]c2cc(Cl)ccc2o1
[O][=C][NH1][C][=C][C][Branch1][C][Cl][=C][C][=C][Ring1][#Branch1][O][Ring1][#Branch2]
TZFWDZFKRBELIQ-UHFFFAOYSA-N
5-chloro-3H-1,3-benzoxazol-2-one
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a, b, c, d, or e without using any additional words. Options: (a) CCCCCCC(N)C(=O)N[C@@H](Cc1c(C)cc(O)cc1C)C(=O)N1CCC[C@@H]1C(=O)N[C@@H](Cc1c[nH]c2ccccc12)C(=O)N[C@@H](Cc1ccccc1)C(N)=O (b) CCOC(=O)COc1ccc(C(=O)CN2CCN(C3CCN(C(=O)OC(C)OC(C)=O)CC3)CC2=O)cc1 (c) O=c1[nH]c2cc(Cl)ccc2o1 (d) C/C=C/C#CCC/C=C\C=C\C(=O)NCC(C)C (e) COc1cccc2c1C(=O)c1c(O)c3c(c(O)c1C2=O)C[C@@](O)(C(C)=O)C[C@@H]3O[C@H]1C[C@H](N)[C@H](O)[C@H](C)O1 Answer: c
Dextromethorphan
COc1ccc2c(c1)C13CCCCC1C(C2)N(C)CC3
-4.74
test
COc1ccc2c(c1)C13CCCCC1C(C2)N(C)CC3
[C][O][C][=C][C][=C][C][=Branch1][Ring2][=C][Ring1][=Branch1][C][C][C][C][C][C][Ring1][=Branch1][C][Branch1][Ring2][C][Ring1][O][N][Branch1][C][C][C][C][Ring1][N]
MKXZASYAUGDDCJ-UHFFFAOYSA-N
4-methoxy-17-methyl-17-azatetracyclo[7.5.3.01,10.02,7]heptadeca-2(7),3,5-triene
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a, b, c, or d without using any other words. Options: a. CNCCN[C@H](c1cc(C)ccc1N1CCN(C(=O)[C@H](C)Cc2ccc(Cl)cc2F)CC1)C(C)C b. COc1ccc(CN(CCN(C)C)c2ccccn2)cc1 c. NC(N)=NN=Cc1c(Cl)cccc1Cl d. COc1ccc2c(c1)C13CCCCC1C(C2)N(C)CC3 Answer: d
Enalaprilat
C[C@H](N[C@H](CCc1ccccc1)C(=O)O)C(=O)N1CCC[C@@H]1C(=O)O
-5.88
test
C[C@H](N[C@H](CCc1ccccc1)C(=O)O)C(=O)N1CCC[C@@H]1C(=O)O
[C][C@H1][Branch2][Ring1][Ring2][N][C@H1][Branch1][O][C][C][C][=C][C][=C][C][=C][Ring1][=Branch1][C][=Branch1][C][=O][O][C][=Branch1][C][=O][N][C][C][C][C@@H1][Ring1][Branch1][C][=Branch1][C][=O][O]
LZFZMUMEGBBDTC-NWANDNLSSA-N
(2R)-1-[(2S)-2-[[(1R)-1-carboxy-3-phenylpropyl]amino]propanoyl]pyrrolidine-2-carboxylic acid
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a or b without using any other words. Options: [a] C[C@H](N[C@H](CCc1ccccc1)C(=O)O)C(=O)N1CCC[C@@H]1C(=O)O [b] O=C(O)Cc1ccccc1Nc1c(Cl)cccc1Cl Answer: a
Fluoxetine
CNCCC(Oc1ccc(C)cc1)c1ccccc1
-4.55
test
CNCCC(Oc1ccc(C)cc1)c1ccccc1
[C][N][C][C][C][Branch1][=N][O][C][=C][C][=C][Branch1][C][C][C][=C][Ring1][#Branch1][C][=C][C][=C][C][=C][Ring1][=Branch1]
HBZGYXADKHAYTM-UHFFFAOYSA-N
N-methyl-3-(4-methylphenoxy)-3-phenylpropan-1-amine
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a, b, or c without using any other words. Options: a. CNCCC(Oc1ccc(C)cc1)c1ccccc1 b. CCN(CC)c1ccc2cc(C(=O)NC3(C(=O)N[C@H](Cc4ccccc4)C(=O)NCC4CCN(CC5CCOCC5)CC4)CCCC3)sc2c1 c. CC(=O)N[C@H](C)C(=O)NCCc1ccccc1 Answer: a
Lamivudine
Nc1ccn([C@@H]2CS[C@H](CO)O2)c(=O)n1
-5.42
test
Nc1ccn([C@@H]2CS[C@H](CO)O2)c(=O)n1
[N][C][C][=C][N][Branch1][N][C@@H1][C][S][C@H1][Branch1][Ring1][C][O][O][Ring1][#Branch1][C][=Branch1][C][=O][N][=Ring1][=C]
JTEGQNOMFQHVDC-NKWVEPMBSA-N
4-amino-1-[(2R,5S)-2-(hydroxymethyl)-1,3-oxathiolan-5-yl]pyrimidin-2-one
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a, b, c, or d without using any additional words. Options: a. Nc1ccn([C@@H]2CS[C@H](CO)O2)c(=O)n1 b. Cc1nccc2c1[nH]c1ccccc12 c. CC(C)C[C@H]1NC(=O)[C@@H](CC2CCCCC2)NC(=O)CNC(=O)[C@@H](C)NC(=O)[C@H](Cc2ccc(O)cc2)NC(=O)/C=C\c2ccccc2OC1=O d. CNC(=O)C(c1ccc2nc(N)n(C(C)C)c2c1)c1cccc(F)c1F Answer: a
Lomefloxacin
CCn1cc(C(=O)O)c(=O)c2cc(F)c(N3CCNC(C)C3)c(F)c21
-4.8
test
CCn1cc(C(=O)O)c(=O)c2cc(F)c(N3CCNC(C)C3)c(F)c21
[C][C][N][C][=C][Branch1][=Branch1][C][=Branch1][C][=O][O][C][=Branch1][C][=O][C][=C][C][Branch1][C][F][=C][Branch1][N][N][C][C][N][C][Branch1][C][C][C][Ring1][#Branch1][C][Branch1][C][F][=C][Ring1][#C][Ring2][Ring1][#Branch1]
ZEKZLJVOYLTDKK-UHFFFAOYSA-N
1-ethyl-6,8-difluoro-7-(3-methylpiperazin-1-yl)-4-oxoquinoline-3-carboxylicacid
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a or b without using any additional words. Options: a. CCn1cc(C(=O)O)c(=O)c2cc(F)c(N3CCNC(C)C3)c(F)c21 b. NC(N)=N/N=C/c1c(Cl)cccc1Cl Answer: a
Nelfinavir
Cc1c(O)cccc1C(=O)N[C@@H](CSc1ccccc1)[C@H](O)CN1C[C@H]2CCCC[C@H]2C[C@H]1C(=O)NC(C)(C)C
-6.15
test
Cc1c(O)cccc1C(=O)N[C@@H](CSc1ccccc1)[C@H](O)CN1C[C@H]2CCCC[C@H]2C[C@H]1C(=O)NC(C)(C)C
[C][C][=C][Branch1][C][O][C][=C][C][=C][Ring1][#Branch1][C][=Branch1][C][=O][N][C@@H1][Branch1][O][C][S][C][=C][C][=C][C][=C][Ring1][=Branch1][C@H1][Branch1][C][O][C][N][C][C@H1][C][C][C][C][C@H1][Ring1][=Branch1][C][C@H1][Ring1][#Branch2][C][=Branch1][C][=O][N][C][Branch1][C][C][Branch1][C][C][C]
QAGYKUNXZHXKMR-HKWSIXNMSA-N
(3S,4aS,8aS)-N-tert-butyl-2-[(2R,3R)-2-hydroxy-3-[(3-hydroxy-2-methylbenzoyl)amino]-4-phenylsulfanylbutyl]-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinoline-3-carboxamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a, b, or c without using any additional words. Options: a Cn1cncc1CN1CC(N(Cc2cccc(-n3cccc3)c2)S(=O)(=O)c2ccccn2)Cc2cc(C#N)ccc21 b Cc1c(O)cccc1C(=O)N[C@@H](CSc1ccccc1)[C@H](O)CN1C[C@H]2CCCC[C@H]2C[C@H]1C(=O)NC(C)(C)C c N=C(N)NCCC[C@@H](NC(=O)[C@@H](N)Cc1ccc(O)cc1)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](Cc1ccccc1)C(N)=O Answer: b
Olopatadine
CN(C)CC/C=C1/c2ccccc2COc2ccc(CC(=O)O)cc21
-5.01
test
CN(C)CC/C=C1/c2ccccc2COc2ccc(CC(=O)O)cc21
[C][N][Branch1][C][C][C][C][/C][=C][/C][=C][C][=C][C][=C][Ring1][=Branch1][C][O][C][=C][C][=C][Branch1][#Branch1][C][C][=Branch1][C][=O][O][C][=C][Ring1][#Branch2][Ring2][Ring1][Ring1]
JBIMVDZLSHOPLA-LSCVHKIXSA-N
2-[(11Z)-11-[3-(dimethylamino)propylidene]-6H-benzo[c][1]benzoxepin-2-yl]acetic acid
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a, b, or c without using any additional words. Options: a: CN(C)CC/C=C1/c2ccccc2COc2ccc(CC(=O)O)cc21 b: c1ccc(-c2cccnc2)cc1 c: NC(N)=Nc1nc(CSCCC(N)=NS(N)(=O)=O)cs1 Answer: a
Promazine
CN(C)CCCN1c2ccccc2Sc2ccccc21
-4.38
test
CN(C)CCCN1c2ccccc2Sc2ccccc21
[C][N][Branch1][C][C][C][C][C][N][C][=C][C][=C][C][=C][Ring1][=Branch1][S][C][=C][C][=C][C][=C][Ring1][=Branch1][Ring1][=C]
ZGUGWUXLJSTTMA-UHFFFAOYSA-N
N,N-dimethyl-3-phenothiazin-10-ylpropan-1-amine
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a, b, or c without using any other words. Options: [a] CN(C)CCCN1c2ccccc2Sc2ccccc21 [b] CC(C)CC(N)C(=O)NCC(=O)OC[C@@H]1O[C@H](n2cc(F)c(=O)[nH]c2=O)C[C@H]1O [c] CN(C)CC1CCCCC1(O)c1cccc(O)c1 Answer: a
Rofecoxib
NS(=O)(=O)c1ccc(C2=C(c3ccccc3)C(=O)OC2)cc1
-4.62
test
NS(=O)(=O)c1ccc(C2=C(c3ccccc3)C(=O)OC2)cc1
[N][S][=Branch1][C][=O][=Branch1][C][=O][C][=C][C][=C][Branch2][Ring1][Branch1][C][=C][Branch1][=Branch2][C][=C][C][=C][C][=C][Ring1][=Branch1][C][=Branch1][C][=O][O][C][Ring1][N][C][=C][Ring2][Ring1][C]
KKUOWOQXXDOGDC-UHFFFAOYSA-N
4-(5-oxo-4-phenyl-2H-furan-3-yl)benzenesulfonamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a, b, c, d, or e without using any other words. Options: a: COC(=O)c1ccccc1-c1c2ccc(=N)cc-2oc2cc(N)ccc12 b: CN[C@@H](CCSC)C(=O)NC(=O)[C@H](Cc1ccccc1)NC(=O)CNC(=O)[C@@H](C)NC(=O)[C@@H](N)Cc1ccc(O)cc1 c: NS(=O)(=O)c1ccc(C2=C(c3ccccc3)C(=O)OC2)cc1 d: C[C@@H]1O[C@@H](Oc2c(-c3ccc(O)c(O)c3)oc3cc(O)cc(O)c3c2=O)[C@@H](O)[C@H](O)[C@@H]1O e: Cc1ccnc2nc(Cc3nc4ccc(C(=N)N)cc4[nH]3)[nH]c12 Answer: c
Sorivudine (BVaraU)
O=c1[nH]c(=O)n([C@@H]2O[C@H](CO)[C@@H](O)[C@@H]2O)cc1/C=C/Br
-5.39
test
O=c1[nH]c(=O)n([C@@H]2O[C@H](CO)[C@@H](O)[C@@H]2O)cc1/C=C/Br
[O][=C][NH1][C][=Branch1][C][=O][N][Branch1][S][C@@H1][O][C@H1][Branch1][Ring1][C][O][C@@H1][Branch1][C][O][C@@H1][Ring1][Branch2][O][C][=C][Ring1][S][/C][=C][/Br]
GCQYYIHYQMVWLT-HQNLTJAPSA-N
5-[(E)-2-bromoethenyl]-1-[(2R,3S,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidine-2,4-dione
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a or b without using any other words. Options: [a] CC1(C)S[C@]2(C)[C@H](NC(=O)[C@H](N)c3ccccc3)C(=O)N2[C@H]1C(=O)O [b] O=c1[nH]c(=O)n([C@@H]2O[C@H](CO)[C@@H](O)[C@@H]2O)cc1/C=C/Br Answer: b
Zomepirac
Cc1cc(CC(=O)O)n(C)c1C(=O)c1ccc(Cl)cc1
-4.61
test
Cc1cc(CC(=O)O)n(C)c1C(=O)c1ccc(Cl)cc1
[C][C][C][=C][Branch1][#Branch1][C][C][=Branch1][C][=O][O][N][Branch1][C][C][C][=Ring1][#Branch2][C][=Branch1][C][=O][C][=C][C][=C][Branch1][C][Cl][C][=C][Ring1][#Branch1]
ZXVNMYWKKDOREA-UHFFFAOYSA-N
2-[5-(4-chlorobenzoyl)-1,4-dimethylpyrrol-2-yl]acetic acid
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a, b, or c without using any additional words. Options: a Cc1cc(CC(=O)O)n(C)c1C(=O)c1ccc(Cl)cc1 b CCCc1nn(C)c2c(=O)nc(-c3cc(S(=O)(=O)N4CCN(C)CC4)ccc3OCC)[nH]c12 c Nc1nc(O)c2ncn([C@@H]3C[C@H](CO)[C@H]3CO)c2n1 Answer: a
N-Acetyl-D-valyl-D-phenylalanine N-Methylamide (3a)
CNC(=O)[C@@H](Cc1ccccc1)NC(=O)[C@H](NC(C)=O)C(C)C
-5.390024
test
CNC(=O)[C@@H](Cc1ccccc1)NC(=O)[C@H](NC(C)=O)C(C)C
[C][N][C][=Branch1][C][=O][C@@H1][Branch1][#Branch2][C][C][=C][C][=C][C][=C][Ring1][=Branch1][N][C][=Branch1][C][=O][C@H1][Branch1][#Branch1][N][C][Branch1][C][C][=O][C][Branch1][C][C][C]
XXPVTTLGDCSDFS-HUUCEWRRSA-N
(2R)-2-acetamido-3-methyl-N-[(2R)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]butanamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a, b, c, d, or e without using any additional words. Options: a.) Cc1ccc(S(=O)(=O)NC(=O)C(c2ccc3c(c2)OCO3)c2cn(C)c3cc(CO)ccc23)cc1 b.) Oc1cc(O)c2c(c1)OC(c1ccc(O)c(O)c1)C(O)C2 c.) N=C(NO)c1cccc(CC(CC(=O)N2CCC(C(=O)O)CC2)NS(=O)(=O)c2ccc3ccccc3c2)c1 d.) CNC(=O)[C@@H](Cc1ccccc1)NC(=O)[C@H](NC(C)=O)C(C)C e.) CCOC(=O)COc1ccc(C(=O)CN2CCN(C3CCN(C(=O)OC(C)OC(C)=O)CC3)CC2=O)cc1 Answer: d
Betaxolol ester
CC(C)NCC(COc1ccc(CCOCC2CC2)cc1)OC(=O)C1CC1
-4.130081
test
CC(C)NCC(COc1ccc(CCOCC2CC2)cc1)OC(=O)C1CC1
[C][C][Branch1][C][C][N][C][C][Branch2][Ring1][=Branch1][C][O][C][=C][C][=C][Branch1][#Branch2][C][C][O][C][C][C][C][Ring1][Ring1][C][=C][Ring1][=N][O][C][=Branch1][C][=O][C][C][C][Ring1][Ring1]
RMCCVMBYOLNQFN-UHFFFAOYSA-N
[1-[4-[2-(cyclopropylmethoxy)ethyl]phenoxy]-3-(propan-2-ylamino)propan-2-yl] cyclopropanecarboxylate
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a, b, c, d, or e without using any additional words. Options: a CC(C)NCC(COc1ccc(CCOCC2CC2)cc1)OC(=O)C1CC1 b ON1C=CC=C(c2cc3nccc(-c4ccc(OC(F)F)c(OCC5CC5)c4)n3n2)C1 c Cc1cnc(N/C(O)=C2/C(=O)c3ccccc3S(=O)(=O)N2C)s1 d COc1cc(OC)c2c(=O)cc(-c3ccccc3)oc2c1 e CC(C)(C)NC(=O)[C@@H]1CN(Cc2cccnc2)CCN1C[C@@H](O)C[C@@H](Cc1ccccc1)C(=O)N[C@H]1c2ccccc2C[C@H]1O Answer: a
Epinephrine
CNCC(O)c1ccc(O)c(O)c1
-6.018865
test
CNCC(O)c1ccc(O)c(O)c1
[C][N][C][C][Branch1][C][O][C][=C][C][=C][Branch1][C][O][C][Branch1][C][O][=C][Ring1][Branch2]
UCTWMZQNUQWSLP-UHFFFAOYSA-N
4-[1-hydroxy-2-(methylamino)ethyl]cyclohexa-1,3,5-triene-1,2-diol
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a, b, c, or d without using any additional words. Options: (a) CNCC(O)c1ccc(O)c(O)c1 (b) CCCCCCCCCCCCc1ccc(S(=O)(=O)Nc2nncs2)cc1 (c) Oc1cc(O)c2c(c1)O[C@H](c1ccc(O)c(O)c1)[C@H](O)C2 (d) COc1ccc2c(=O)cc(-c3ccccc3)oc2c1 Answer: a
Fleroxacin
CN1CCN(c2c(F)cc3c(=O)c(C(=O)O)cn(CCF)c3c2F)CC1
-4.809974
test
CN1CCN(c2c(F)cc3c(=O)c(C(=O)O)cn(CCF)c3c2F)CC1
[C][N][C][C][N][Branch2][Ring2][Ring1][C][=C][Branch1][C][F][C][=C][C][=Branch1][C][=O][C][Branch1][=Branch1][C][=Branch1][C][=O][O][=C][N][Branch1][Ring2][C][C][F][C][Ring1][=N][=C][Ring2][Ring1][C][F][C][C][Ring2][Ring1][=Branch2]
XBJBPGROQZJDOJ-UHFFFAOYSA-N
6,8-difluoro-1-(2-fluoroethyl)-7-(4-methylpiperazin-1-yl)-4-oxoquinoline-3-carboxylic acid
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell permeability. Constraint: You must select all options from a, b, c, d, or e without using any other words. Options: a: COc1ccc2c(O[C@@H]3C[C@H]4C(=O)N[C@]5(C(=O)NS(=O)(=O)C6CC6)C[C@H]5/C=C\CCCCN(C)C(=O)[C@@H]4C3)nc(-c3nc(C(C)C)cs3)nc2c1 b: CN1CCN(c2c(F)cc3c(=O)c(C(=O)O)cn(CCF)c3c2F)CC1 c: O=C(COc1ccc(C(=O)CN2CCN(C3CCN(C(=O)OC/C=C4/OC(=O)c5ccccc54)CC3)CC2=O)cc1)OC1CCCCC1 d: CC1NC(=O)C(CC(=O)O)NC(=O)CNC(=O)CNC(=O)C(C)NC(=O)C(Cc2c[nH]c3ccccc23)NC1=O e: Cn1cnc(S(=O)(=O)N(CCN(Cc2cncn2C)c2ccc(C#N)cc2)CC2CCCCC2)c1 Answer: b
BVaraU
O=c1[nH]c(=O)n([C@H]2O[C@@H](CO)[C@H](O)[C@H]2O)cc1/C=C/Br
-5.39897
test
O=c1[nH]c(=O)n([C@H]2O[C@@H](CO)[C@H](O)[C@H]2O)cc1/C=C/Br
[O][=C][NH1][C][=Branch1][C][=O][N][Branch1][S][C@H1][O][C@@H1][Branch1][Ring1][C][O][C@H1][Branch1][C][O][C@H1][Ring1][Branch2][O][C][=C][Ring1][S][/C][=C][/Br]
GCQYYIHYQMVWLT-AADLVWAJSA-N
5-[(E)-2-bromoethenyl]-1-[(2S,3R,4R,5S)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidine-2,4-dione
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a, b, or c without using any other words. Options: a: O=C(O)CC(CC1CCN(C(=O)CCc2ccc3c(n2)NCCC3)CC1)C1CNc2ccccc2C1 b: NC(=O)[C@H](Cc1ccccc1)NC(=O)[C@H](Cc1ccccc1)NC(=O)[C@H](CCCN=C(N)N)NC(=O)[C@@H](N)Cc1ccc(O)cc1 c: O=c1[nH]c(=O)n([C@H]2O[C@@H](CO)[C@H](O)[C@H]2O)cc1/C=C/Br Answer: c
H 95/71
CC(C)NCC(O)COc1ccc(NC=O)cc1
-5.427984
test
CC(C)NCC(O)COc1ccc(NC=O)cc1
[C][C][Branch1][C][C][N][C][C][Branch1][C][O][C][O][C][=C][C][=C][Branch1][Ring2][N][C][=O][C][=C][Ring1][=Branch2]
XRTJUQUBUGUQLA-UHFFFAOYSA-N
N-[4-[2-hydroxy-3-(propan-2-ylamino)propoxy]phenyl]formamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 permeability. Constraint: You must select all options from a, b, c, or d without using any other words. Options: (a) CN[C@@H](C)[C@@H](O)c1ccccc1 (b) CC(C)NCC(O)COc1ccc(NC=O)cc1 (c) O=C1NCC2(CCCNC2)c2[nH]c(-c3ccnc(-c4cc5ccccc5o4)n3)cc21 (d) CCCCOc1cccc(NC(=O)OCCN2CCCC2)c1 Answer: b
PNU-184148
O=C(CO)N1CCN(c2ccc(N3C[C@H](CNC(=S)C4CC4)OC3=O)cc2F)CC1
-4.430899
test
O=C(CO)N1CCN(c2ccc(N3C[C@H](CNC(=S)C4CC4)OC3=O)cc2F)CC1
[O][=C][Branch1][Ring1][C][O][N][C][C][N][Branch2][Ring2][Ring1][C][=C][C][=C][Branch2][Ring1][=Branch1][N][C][C@H1][Branch1][N][C][N][C][=Branch1][C][=S][C][C][C][Ring1][Ring1][O][C][Ring1][N][=O][C][=C][Ring2][Ring1][Ring1][F][C][C][Ring2][Ring1][#Branch2]
GBGSQPWVUKYRIX-HNNXBMFYSA-N
N-[[(5S)-3-[3-fluoro-4-[4-(2-hydroxyacetyl)piperazin-1-yl]phenyl]-2-oxo-1,3-oxazolidin-5-yl]methyl]cyclopropanecarbothioamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a, b, c, d, or e without using any additional words. Options: a Fc1cccc2c1O[C@H]1CNC[C@@H]1O2 b C=CCNC(=O)C(=O)C(CCC)NC(=O)C1C2C(CN1C(=O)C(NC(=O)NC(C(=O)C(C)C)C(C)C)C(C)(C)C)C2(C)C c O=C(CO)N1CCN(c2ccc(N3C[C@H](CNC(=S)C4CC4)OC3=O)cc2F)CC1 d CC1=C(C(=O)O)N2C(=O)[C@@H](NC(=O)[C@@H](N)C3=CCC=CC3)[C@H]2SC1 e CCc1cc(C(N)=S)ccn1 Answer: c
PNU-184421
CC(=O)NC[C@H]1CN(c2ccc(-c3ccc(C#N)nc3)c(F)c2)C(=O)O1
-4.378376
test
CC(=O)NC[C@H]1CN(c2ccc(-c3ccc(C#N)nc3)c(F)c2)C(=O)O1
[C][C][=Branch1][C][=O][N][C][C@H1][C][N][Branch2][Ring1][#Branch2][C][=C][C][=C][Branch1][=N][C][=C][C][=C][Branch1][Ring1][C][#N][N][=C][Ring1][Branch2][C][Branch1][C][F][=C][Ring1][#C][C][=Branch1][C][=O][O][Ring2][Ring1][Branch1]
FIMPFIHOGOZRIN-HNNXBMFYSA-N
N-[[(5S)-3-[4-(6-cyanopyridin-3-yl)-3-fluorophenyl]-2-oxo-1,3-oxazolidin-5-yl]methyl]acetamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a, b, c, or d without using any other words. Options: (a) CC(=O)NC[C@H]1CN(c2ccc(-c3ccc(C#N)nc3)c(F)c2)C(=O)O1 (b) O=c1cc(-c2ccc(O)cc2)oc2cc(O[C@@H]3O[C@H](CO)[C@@H](O)[C@H](O)[C@H]3O[C@@H]3OC[C@](O)(CO)[C@H]3O)cc(O)c12 (c) NC(N)=N/N=C/c1c(Cl)cccc1Cl (d) COc1cc(C(=O)N2CC[C@](CCN3CCC(C(N)=O)(c4ccccc4)CC3)(c3ccc(Cl)c(Cl)c3)C2)cc(OC)c1OC Answer: a
PNU-179399
NC(=S)NC[C@H]1CN(c2ccc(C3CCS(=O)(=O)CC3)c(F)c2)C(=O)O1
-5.888028
test
NC(=S)NC[C@H]1CN(c2ccc(C3CCS(=O)(=O)CC3)c(F)c2)C(=O)O1
[N][C][=Branch1][C][=S][N][C][C@H1][C][N][Branch2][Ring1][N][C][=C][C][=C][Branch1][#C][C][C][C][S][=Branch1][C][=O][=Branch1][C][=O][C][C][Ring1][Branch2][C][Branch1][C][F][=C][Ring1][#C][C][=Branch1][C][=O][O][Ring2][Ring1][Branch1]
OXTPTXFMDKIQLD-LBPRGKRZSA-N
[(5S)-3-[4-(1,1-dioxothian-4-yl)-3-fluorophenyl]-2-oxo-1,3-oxazolidin-5-yl]methylthiourea
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a, b, or c without using any additional words. Options: a.) NC(=S)NC[C@H]1CN(c2ccc(C3CCS(=O)(=O)CC3)c(F)c2)C(=O)O1 b.) O=C(O)c1cc(/N=N/c2ccc(S(=O)(=O)Nc3ccccn3)cc2)ccc1O c.) CS(=O)(=O)N[C@H](Cc1ccccc1)C(=O)N1CCC[C@H]1C(=O)NCC1CCN(C(=N)N)CC1 Answer: a
6MAQH (W2)
O=C(CS)NCCCCCC(=O)Nc1cccc2cccnc12
-4.849622
test
O=C(CS)NCCCCCC(=O)Nc1cccc2cccnc12
[O][=C][Branch1][Ring1][C][S][N][C][C][C][C][C][C][=Branch1][C][=O][N][C][=C][C][=C][C][=C][C][=C][N][=C][Ring1][#Branch2][Ring1][=Branch1]
KQBNGYXGCIUPHR-UHFFFAOYSA-N
N-quinolin-8-yl-6-[(2-sulfanylacetyl)amino]hexanamide
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest {permeability__names__noun}. Constraint: You must select all options from {%multiple_choice_enum%2-5%aA1} without using any {#other|additional!} words. Options: {SMILES%permeability%} Answer: {%multiple_choice_result}
Task: Please answer the multiple choice question. Question: Rank these molecules from lowest to highest Caco-2 cell effective permeability. Constraint: You must select all options from a or b without using any other words. Options: (a) O=C(CS)NCCCCCC(=O)Nc1cccc2cccnc12 (b) O=C1C[C@@H](c2ccc(O)c(O)c2)Oc2cc(O)cc(O)c21 Answer: a