Upload README.md with huggingface_hub
Browse files
README.md
CHANGED
@@ -6,7 +6,7 @@ tags:
|
|
6 |
- genomics
|
7 |
- single-cell
|
8 |
- anndata_version:0.11.3
|
9 |
-
- python_version:3.11.
|
10 |
- popV
|
11 |
- 'tissue: diverse'
|
12 |
---
|
@@ -32,307 +32,307 @@ computed on a 10% random subset of the data that was not used for training.
|
|
32 |
|
33 |
| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |
|
34 |
| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |
|
35 |
-
| B cell |
|
36 |
-
| mesenchymal stem cell |
|
37 |
-
| basal cell of epidermis |
|
38 |
-
| granulocyte |
|
39 |
-
| endothelial cell |
|
40 |
-
| microglial cell |
|
41 |
-
| T cell | 1244 | 0.
|
42 |
-
| keratinocyte |
|
43 |
-
| macrophage |
|
44 |
-
| classical monocyte |
|
45 |
-
| granulocytopoietic cell |
|
46 |
-
| bladder urothelial cell |
|
47 |
-
| mesenchymal stem cell of adipose tissue |
|
48 |
-
| fibroblast of cardiac tissue |
|
49 |
-
| endothelial cell of coronary artery |
|
50 |
-
| skeletal muscle satellite cell |
|
51 |
-
| proerythroblast |
|
52 |
-
| kidney proximal convoluted tubule epithelial cell |
|
53 |
-
| bronchial smooth muscle cell |
|
54 |
-
| myeloid cell |
|
55 |
-
| hepatocyte |
|
56 |
-
| type B pancreatic cell |
|
57 |
-
| bladder cell |
|
58 |
-
| promonocyte |
|
59 |
-
| DN4 thymocyte |
|
60 |
-
| basal cell |
|
61 |
-
| monocyte |
|
62 |
-
| enterocyte of epithelium of large intestine |
|
63 |
-
| thymocyte |
|
64 |
-
| epithelial cell of proximal tubule |
|
65 |
-
| natural killer cell |
|
66 |
-
| naive B cell |
|
67 |
-
| hematopoietic stem cell |
|
68 |
-
| mature NK T cell |
|
69 |
-
| fibroblast |
|
70 |
-
| stromal cell |
|
71 |
-
| keratinocyte stem cell |
|
72 |
-
| erythroblast |
|
73 |
-
| Kupffer cell |
|
74 |
-
| megakaryocyte-erythroid progenitor cell |
|
75 |
-
| pancreatic acinar cell |
|
76 |
-
| luminal epithelial cell of mammary gland |
|
77 |
-
| professional antigen presenting cell |
|
78 |
-
| epidermal cell |
|
79 |
-
| hematopoietic precursor cell |
|
80 |
-
| oligodendrocyte |
|
81 |
-
| fibroblast of lung |
|
82 |
-
| CD8-positive, alpha-beta T cell |
|
83 |
-
| epithelial cell of large intestine |
|
84 |
-
| intestinal crypt stem cell |
|
85 |
-
| chondrocyte |
|
86 |
-
| immature T cell |
|
87 |
-
| precursor B cell |
|
88 |
-
| intermediate monocyte |
|
89 |
-
| large intestine goblet cell |
|
90 |
-
| CD4-positive, alpha-beta T cell |
|
91 |
-
| smooth muscle cell |
|
92 |
-
| leukocyte |
|
93 |
-
| plasma cell |
|
94 |
-
| lymphocyte |
|
95 |
-
| naive T cell |
|
96 |
-
| kidney loop of Henle thick ascending limb epithelial cell |
|
97 |
-
| immature B cell |
|
98 |
-
| alveolar macrophage |
|
99 |
-
| endothelial cell of hepatic sinusoid |
|
100 |
-
| lung macrophage |
|
101 |
-
| non-classical monocyte |
|
102 |
-
| endocardial cell |
|
103 |
-
| double negative thymocyte |
|
104 |
-
| late pro-B cell |
|
105 |
-
| kidney collecting duct principal cell |
|
106 |
-
| basal epithelial cell of tracheobronchial tree | 87 | 0.
|
107 |
-
| mesenchymal cell |
|
108 |
-
| pancreatic A cell |
|
109 |
-
| adventitial cell |
|
110 |
-
| epithelial cell |
|
111 |
-
| kidney distal convoluted tubule epithelial cell |
|
112 |
-
| neutrophil |
|
113 |
-
| pancreatic ductal cell |
|
114 |
-
| myeloid dendritic cell |
|
115 |
-
| astrocyte |
|
116 |
-
| secretory cell |
|
117 |
-
| myeloid leukocyte |
|
118 |
-
| plasmatocyte |
|
119 |
-
|
|
120 |
-
|
|
121 |
-
| vein endothelial cell |
|
122 |
-
|
|
123 |
-
|
|
124 |
-
| aortic endothelial cell |
|
125 |
-
| brush cell |
|
126 |
-
| erythroid progenitor cell, mammalian |
|
127 |
-
| regular atrial cardiac myocyte |
|
128 |
-
| kidney cortex artery cell |
|
129 |
-
| erythrocyte | 44 | 0.
|
130 |
-
| mesangial cell |
|
131 |
-
| kidney loop of Henle ascending limb epithelial cell |
|
132 |
-
| cardiac muscle cell |
|
133 |
-
| mature alpha-beta T cell | 37 | 0.00 | 0.
|
134 |
-
| basophil |
|
135 |
-
| cardiac valve cell |
|
136 |
-
| oligodendrocyte precursor cell |
|
137 |
-
| Schwann cell |
|
138 |
-
| pulmonary interstitial fibroblast |
|
139 |
-
| smooth muscle cell of trachea |
|
140 |
-
| granulocyte monocyte progenitor cell |
|
141 |
-
| interneuron |
|
142 |
-
| pancreatic PP cell |
|
143 |
-
| smooth muscle cell of the pulmonary artery |
|
144 |
-
| cell of skeletal muscle |
|
145 |
-
|
|
146 |
-
|
|
147 |
-
| stem cell of epidermis |
|
148 |
-
| regulatory T cell |
|
149 |
-
| epithelial cell of thymus |
|
150 |
-
| enteroendocrine cell |
|
151 |
-
| kidney capillary endothelial cell |
|
152 |
-
| neuroepithelial stem cell |
|
153 |
-
| macrophage dendritic cell progenitor |
|
154 |
-
| DN3 thymocyte |
|
155 |
-
| regular ventricular cardiac myocyte |
|
156 |
-
| endothelial cell of lymphatic vessel |
|
157 |
-
| ciliated columnar cell of tracheobronchial tree |
|
158 |
-
| plasmacytoid dendritic cell |
|
159 |
-
| dendritic cell | 10 | 0.00 | 0.
|
160 |
-
| medium spiny neuron |
|
161 |
-
| pericyte |
|
162 |
-
| neural stem cell |
|
163 |
-
| kidney proximal straight tubule epithelial cell |
|
164 |
-
| blood cell |
|
165 |
-
| immature NK T cell |
|
166 |
-
| cardiac neuron |
|
167 |
-
| mast cell |
|
168 |
-
| mucus secreting cell |
|
169 |
-
| early pro-B cell |
|
170 |
-
| pancreatic stellate cell |
|
171 |
-
| ependymal cell |
|
172 |
-
| Bergmann glial cell |
|
173 |
-
| neuroendocrine cell |
|
174 |
| fibrocyte | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
|
175 |
-
| hepatic stellate cell |
|
176 |
-
| club cell |
|
177 |
-
| respiratory basal cell |
|
178 |
-
| kidney interstitial fibroblast |
|
179 |
-
| lymphoid lineage restricted progenitor cell |
|
180 |
| lung neuroendocrine cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
|
181 |
| kidney cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
|
182 |
-
| duct epithelial cell |
|
183 |
|
184 |
The train accuracies are computed on the training data.
|
185 |
|
186 |
| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |
|
187 |
| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |
|
188 |
-
| B cell |
|
189 |
-
| mesenchymal stem cell |
|
190 |
-
| basal cell of epidermis |
|
191 |
-
| granulocyte |
|
192 |
-
| endothelial cell |
|
193 |
-
| microglial cell |
|
194 |
-
| T cell |
|
195 |
-
| keratinocyte |
|
196 |
-
| macrophage |
|
197 |
-
| classical monocyte |
|
198 |
-
| granulocytopoietic cell |
|
199 |
-
| bladder urothelial cell |
|
200 |
-
| mesenchymal stem cell of adipose tissue |
|
201 |
-
| fibroblast of cardiac tissue |
|
202 |
-
| endothelial cell of coronary artery |
|
203 |
-
| skeletal muscle satellite cell |
|
204 |
-
| proerythroblast |
|
205 |
-
| kidney proximal convoluted tubule epithelial cell |
|
206 |
-
| bronchial smooth muscle cell |
|
207 |
-
| myeloid cell |
|
208 |
-
| hepatocyte |
|
209 |
-
| type B pancreatic cell |
|
210 |
-
| bladder cell |
|
211 |
-
| promonocyte |
|
212 |
-
| DN4 thymocyte |
|
213 |
-
| basal cell |
|
214 |
-
| monocyte |
|
215 |
-
| enterocyte of epithelium of large intestine |
|
216 |
-
| thymocyte |
|
217 |
-
| epithelial cell of proximal tubule |
|
218 |
-
| natural killer cell |
|
219 |
-
| naive B cell |
|
220 |
-
| hematopoietic stem cell |
|
221 |
-
| mature NK T cell |
|
222 |
-
| fibroblast |
|
223 |
-
| stromal cell |
|
224 |
-
| keratinocyte stem cell |
|
225 |
-
| erythroblast |
|
226 |
-
| Kupffer cell |
|
227 |
-
| megakaryocyte-erythroid progenitor cell |
|
228 |
-
| pancreatic acinar cell |
|
229 |
-
| luminal epithelial cell of mammary gland |
|
230 |
-
| professional antigen presenting cell |
|
231 |
-
| epidermal cell |
|
232 |
-
| hematopoietic precursor cell |
|
233 |
-
| oligodendrocyte |
|
234 |
-
| fibroblast of lung |
|
235 |
-
| CD8-positive, alpha-beta T cell |
|
236 |
-
| epithelial cell of large intestine |
|
237 |
-
| intestinal crypt stem cell |
|
238 |
-
| chondrocyte |
|
239 |
-
| immature T cell |
|
240 |
-
| precursor B cell |
|
241 |
-
| intermediate monocyte |
|
242 |
-
| large intestine goblet cell |
|
243 |
-
| CD4-positive, alpha-beta T cell |
|
244 |
-
| smooth muscle cell |
|
245 |
-
| leukocyte |
|
246 |
-
| plasma cell |
|
247 |
-
| lymphocyte |
|
248 |
-
| naive T cell |
|
249 |
-
| kidney loop of Henle thick ascending limb epithelial cell |
|
250 |
-
| immature B cell |
|
251 |
-
| alveolar macrophage |
|
252 |
-
| endothelial cell of hepatic sinusoid |
|
253 |
-
| lung macrophage |
|
254 |
-
| non-classical monocyte |
|
255 |
-
| endocardial cell |
|
256 |
-
| double negative thymocyte |
|
257 |
-
| late pro-B cell |
|
258 |
-
| kidney collecting duct principal cell |
|
259 |
-
| basal epithelial cell of tracheobronchial tree | 838 | 0.
|
260 |
-
| mesenchymal cell |
|
261 |
-
| pancreatic A cell |
|
262 |
-
| adventitial cell |
|
263 |
-
| epithelial cell |
|
264 |
-
| kidney distal convoluted tubule epithelial cell |
|
265 |
-
| neutrophil |
|
266 |
-
| pancreatic ductal cell |
|
267 |
-
| myeloid dendritic cell |
|
268 |
-
| astrocyte |
|
269 |
-
| secretory cell |
|
270 |
-
| myeloid leukocyte |
|
271 |
-
| plasmatocyte |
|
272 |
-
|
|
273 |
-
|
|
274 |
-
| vein endothelial cell |
|
275 |
-
|
|
276 |
-
|
|
277 |
-
| aortic endothelial cell |
|
278 |
-
| brush cell |
|
279 |
-
| erythroid progenitor cell, mammalian |
|
280 |
-
| regular atrial cardiac myocyte |
|
281 |
-
| kidney cortex artery cell |
|
282 |
-
| erythrocyte | 312 | 0.
|
283 |
-
| mesangial cell |
|
284 |
-
| kidney loop of Henle ascending limb epithelial cell |
|
285 |
-
| cardiac muscle cell |
|
286 |
-
| mature alpha-beta T cell | 293 | 0.00 | 0.
|
287 |
-
| basophil |
|
288 |
-
| cardiac valve cell |
|
289 |
-
| oligodendrocyte precursor cell |
|
290 |
-
| Schwann cell |
|
291 |
-
| pulmonary interstitial fibroblast | 248 | 0.
|
292 |
-
| smooth muscle cell of trachea |
|
293 |
-
| granulocyte monocyte progenitor cell |
|
294 |
-
| interneuron |
|
295 |
-
| pancreatic PP cell |
|
296 |
-
| smooth muscle cell of the pulmonary artery |
|
297 |
-
| cell of skeletal muscle |
|
298 |
-
|
|
299 |
-
|
|
300 |
-
| stem cell of epidermis |
|
301 |
-
| regulatory T cell |
|
302 |
-
| epithelial cell of thymus |
|
303 |
-
| enteroendocrine cell |
|
304 |
-
| kidney capillary endothelial cell |
|
305 |
-
| neuroepithelial stem cell |
|
306 |
-
| macrophage dendritic cell progenitor |
|
307 |
-
| DN3 thymocyte |
|
308 |
-
| regular ventricular cardiac myocyte |
|
309 |
-
| endothelial cell of lymphatic vessel |
|
310 |
-
| ciliated columnar cell of tracheobronchial tree |
|
311 |
-
| plasmacytoid dendritic cell |
|
312 |
-
| dendritic cell | 97 | 0.00 | 0.
|
313 |
-
| medium spiny neuron |
|
314 |
-
| pericyte |
|
315 |
-
| neural stem cell |
|
316 |
-
| kidney proximal straight tubule epithelial cell |
|
317 |
-
| blood cell |
|
318 |
-
| immature NK T cell |
|
319 |
-
| cardiac neuron |
|
320 |
-
| mast cell |
|
321 |
-
| mucus secreting cell |
|
322 |
-
| early pro-B cell |
|
323 |
-
| pancreatic stellate cell |
|
324 |
-
| ependymal cell |
|
325 |
-
| Bergmann glial cell |
|
326 |
-
| neuroendocrine cell |
|
327 |
-
| fibrocyte | 39 | 0.00 | 0.00 | 0.
|
328 |
-
| hepatic stellate cell |
|
329 |
-
| club cell |
|
330 |
-
| respiratory basal cell |
|
331 |
-
| kidney interstitial fibroblast |
|
332 |
-
| lymphoid lineage restricted progenitor cell |
|
333 |
-
| lung neuroendocrine cell | 8 | 0.00 | 0.00 |
|
334 |
-
| kidney cell | 3 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.
|
335 |
-
| duct epithelial cell |
|
336 |
|
337 |
</details>
|
338 |
|
|
|
6 |
- genomics
|
7 |
- single-cell
|
8 |
- anndata_version:0.11.3
|
9 |
+
- python_version:3.11.12
|
10 |
- popV
|
11 |
- 'tissue: diverse'
|
12 |
---
|
|
|
32 |
|
33 |
| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |
|
34 |
| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |
|
35 |
+
| B cell | 3640 | 0.86 | 0.90 | 0.86 | 0.87 | 0.00 | 0.87 | 0.72 | 0.79 | 0.91 |
|
36 |
+
| mesenchymal stem cell | 1646 | 0.87 | 0.88 | 0.87 | 0.75 | 0.00 | 0.66 | 0.91 | 0.86 | 0.93 |
|
37 |
+
| basal cell of epidermis | 1572 | 0.86 | 0.87 | 0.82 | 0.87 | 0.00 | 0.83 | 0.86 | 0.83 | 0.91 |
|
38 |
+
| granulocyte | 1651 | 0.82 | 0.86 | 0.82 | 0.80 | 0.00 | 0.82 | 0.74 | 0.85 | 0.89 |
|
39 |
+
| endothelial cell | 1404 | 0.87 | 0.88 | 0.82 | 0.71 | 0.00 | 0.70 | 0.90 | 0.86 | 0.91 |
|
40 |
+
| microglial cell | 1326 | 0.99 | 0.99 | 0.95 | 0.98 | 0.00 | 0.97 | 0.98 | 0.99 | 0.99 |
|
41 |
+
| T cell | 1244 | 0.78 | 0.80 | 0.66 | 0.63 | 0.00 | 0.73 | 0.65 | 0.74 | 0.81 |
|
42 |
+
| keratinocyte | 1231 | 0.85 | 0.88 | 0.80 | 0.86 | 0.00 | 0.81 | 0.88 | 0.86 | 0.91 |
|
43 |
+
| macrophage | 979 | 0.41 | 0.67 | 0.61 | 0.53 | 0.00 | 0.42 | 0.51 | 0.55 | 0.71 |
|
44 |
+
| classical monocyte | 795 | 0.81 | 0.61 | 0.62 | 0.65 | 0.00 | 0.77 | 0.80 | 0.82 | 0.90 |
|
45 |
+
| granulocytopoietic cell | 806 | 0.65 | 0.80 | 0.66 | 0.67 | 0.00 | 0.63 | 0.68 | 0.80 | 0.82 |
|
46 |
+
| bladder urothelial cell | 634 | 0.98 | 0.98 | 0.94 | 0.92 | 0.00 | 0.83 | 0.99 | 0.98 | 0.98 |
|
47 |
+
| mesenchymal stem cell of adipose tissue | 610 | 0.85 | 0.85 | 0.69 | 0.60 | 0.00 | 0.59 | 0.90 | 0.80 | 0.89 |
|
48 |
+
| fibroblast of cardiac tissue | 616 | 0.96 | 0.95 | 0.80 | 0.67 | 0.00 | 0.58 | 0.96 | 0.92 | 0.97 |
|
49 |
+
| endothelial cell of coronary artery | 583 | 0.85 | 0.88 | 0.64 | 0.50 | 0.00 | 0.37 | 0.89 | 0.85 | 0.92 |
|
50 |
+
| skeletal muscle satellite cell | 420 | 0.97 | 0.97 | 0.93 | 0.97 | 0.00 | 0.96 | 0.96 | 0.94 | 0.97 |
|
51 |
+
| proerythroblast | 442 | 0.50 | 0.53 | 0.45 | 0.26 | 0.00 | 0.62 | 0.45 | 0.65 | 0.64 |
|
52 |
+
| kidney proximal convoluted tubule epithelial cell | 436 | 0.86 | 0.87 | 0.28 | 0.81 | 0.00 | 0.75 | 0.87 | 0.87 | 0.88 |
|
53 |
+
| bronchial smooth muscle cell | 430 | 0.93 | 0.95 | 0.85 | 0.84 | 0.00 | 0.88 | 0.95 | 0.94 | 0.95 |
|
54 |
+
| myeloid cell | 440 | 0.51 | 0.62 | 0.46 | 0.51 | 0.00 | 0.38 | 0.70 | 0.67 | 0.74 |
|
55 |
+
| hepatocyte | 382 | 0.99 | 0.98 | 0.99 | 0.98 | 0.00 | 0.96 | 0.99 | 0.99 | 0.99 |
|
56 |
+
| type B pancreatic cell | 418 | 0.97 | 0.97 | 0.95 | 0.97 | 0.00 | 0.98 | 0.98 | 0.97 | 0.98 |
|
57 |
+
| bladder cell | 383 | 0.97 | 0.96 | 0.93 | 0.67 | 0.00 | 0.78 | 0.99 | 0.95 | 0.99 |
|
58 |
+
| promonocyte | 387 | 0.71 | 0.74 | 0.73 | 0.59 | 0.00 | 0.67 | 0.74 | 0.79 | 0.84 |
|
59 |
+
| DN4 thymocyte | 338 | 0.38 | 0.51 | 0.32 | 0.33 | 0.00 | 0.17 | 0.54 | 0.63 | 0.53 |
|
60 |
+
| basal cell | 360 | 0.98 | 0.97 | 0.98 | 0.95 | 0.00 | 0.92 | 0.98 | 0.96 | 0.98 |
|
61 |
+
| monocyte | 393 | 0.64 | 0.58 | 0.56 | 0.33 | 0.00 | 0.56 | 0.76 | 0.75 | 0.82 |
|
62 |
+
| enterocyte of epithelium of large intestine | 403 | 0.90 | 0.93 | 0.84 | 0.91 | 0.00 | 0.90 | 0.93 | 0.92 | 0.94 |
|
63 |
+
| thymocyte | 372 | 0.74 | 0.74 | 0.65 | 0.83 | 0.00 | 0.80 | 0.88 | 0.91 | 0.86 |
|
64 |
+
| epithelial cell of proximal tubule | 298 | 0.82 | 0.81 | 0.73 | 0.71 | 0.00 | 0.76 | 0.80 | 0.80 | 0.83 |
|
65 |
+
| natural killer cell | 330 | 0.85 | 0.85 | 0.72 | 0.74 | 0.00 | 0.79 | 0.78 | 0.83 | 0.85 |
|
66 |
+
| naive B cell | 342 | 0.46 | 0.25 | 0.55 | 0.47 | 0.00 | 0.48 | 0.49 | 0.51 | 0.61 |
|
67 |
+
| hematopoietic stem cell | 342 | 0.90 | 0.93 | 0.89 | 0.90 | 0.00 | 0.88 | 0.94 | 0.93 | 0.94 |
|
68 |
+
| mature NK T cell | 324 | 0.63 | 0.66 | 0.49 | 0.18 | 0.00 | 0.52 | 0.56 | 0.68 | 0.71 |
|
69 |
+
| fibroblast | 307 | 0.45 | 0.24 | 0.46 | 0.47 | 0.00 | 0.26 | 0.62 | 0.60 | 0.64 |
|
70 |
+
| stromal cell | 340 | 0.74 | 0.53 | 0.70 | 0.32 | 0.00 | 0.35 | 0.89 | 0.73 | 0.87 |
|
71 |
+
| keratinocyte stem cell | 301 | 0.94 | 0.92 | 0.86 | 0.90 | 0.00 | 0.85 | 0.93 | 0.91 | 0.94 |
|
72 |
+
| erythroblast | 266 | 0.65 | 0.69 | 0.68 | 0.56 | 0.00 | 0.62 | 0.69 | 0.74 | 0.80 |
|
73 |
+
| Kupffer cell | 292 | 0.97 | 0.93 | 0.73 | 0.56 | 0.00 | 0.90 | 0.97 | 0.97 | 0.98 |
|
74 |
+
| megakaryocyte-erythroid progenitor cell | 250 | 0.57 | 0.63 | 0.56 | 0.52 | 0.00 | 0.62 | 0.61 | 0.69 | 0.75 |
|
75 |
+
| pancreatic acinar cell | 280 | 0.95 | 0.93 | 0.95 | 0.97 | 0.00 | 0.98 | 0.99 | 0.97 | 0.99 |
|
76 |
+
| luminal epithelial cell of mammary gland | 261 | 0.93 | 0.93 | 0.94 | 0.79 | 0.00 | 0.89 | 0.95 | 0.93 | 0.97 |
|
77 |
+
| professional antigen presenting cell | 221 | 0.03 | 0.01 | 0.08 | 0.00 | 0.00 | 0.00 | 0.35 | 0.35 | 0.05 |
|
78 |
+
| epidermal cell | 249 | 0.87 | 0.87 | 0.81 | 0.81 | 0.00 | 0.85 | 0.89 | 0.85 | 0.90 |
|
79 |
+
| hematopoietic precursor cell | 217 | 0.64 | 0.76 | 0.42 | 0.34 | 0.00 | 0.40 | 0.69 | 0.75 | 0.82 |
|
80 |
+
| oligodendrocyte | 201 | 0.97 | 0.97 | 0.95 | 0.97 | 0.00 | 0.98 | 0.99 | 0.98 | 0.98 |
|
81 |
+
| fibroblast of lung | 188 | 0.96 | 0.96 | 0.93 | 0.92 | 0.00 | 0.95 | 0.98 | 0.95 | 0.97 |
|
82 |
+
| CD8-positive, alpha-beta T cell | 201 | 0.43 | 0.50 | 0.31 | 0.31 | 0.00 | 0.44 | 0.45 | 0.58 | 0.59 |
|
83 |
+
| epithelial cell of large intestine | 214 | 0.82 | 0.83 | 0.56 | 0.78 | 0.00 | 0.79 | 0.85 | 0.84 | 0.87 |
|
84 |
+
| intestinal crypt stem cell | 192 | 0.84 | 0.88 | 0.65 | 0.83 | 0.00 | 0.83 | 0.87 | 0.84 | 0.90 |
|
85 |
+
| chondrocyte | 185 | 0.72 | 0.62 | 0.75 | 0.63 | 0.00 | 0.73 | 0.83 | 0.78 | 0.78 |
|
86 |
+
| immature T cell | 187 | 0.72 | 0.00 | 0.13 | 0.61 | 0.00 | 0.53 | 0.83 | 0.86 | 0.72 |
|
87 |
+
| precursor B cell | 170 | 0.71 | 0.83 | 0.67 | 0.72 | 0.00 | 0.57 | 0.79 | 0.81 | 0.88 |
|
88 |
+
| intermediate monocyte | 193 | 0.23 | 0.03 | 0.31 | 0.33 | 0.00 | 0.61 | 0.53 | 0.56 | 0.65 |
|
89 |
+
| large intestine goblet cell | 171 | 0.80 | 0.85 | 0.76 | 0.79 | 0.00 | 0.83 | 0.92 | 0.86 | 0.88 |
|
90 |
+
| CD4-positive, alpha-beta T cell | 172 | 0.00 | 0.46 | 0.19 | 0.27 | 0.00 | 0.37 | 0.39 | 0.43 | 0.50 |
|
91 |
+
| smooth muscle cell | 184 | 0.64 | 0.80 | 0.73 | 0.66 | 0.00 | 0.75 | 0.86 | 0.82 | 0.78 |
|
92 |
+
| leukocyte | 167 | 0.49 | 0.57 | 0.31 | 0.31 | 0.00 | 0.27 | 0.57 | 0.64 | 0.73 |
|
93 |
+
| plasma cell | 160 | 0.51 | 0.65 | 0.53 | 0.40 | 0.00 | 0.58 | 0.52 | 0.63 | 0.67 |
|
94 |
+
| lymphocyte | 164 | 0.26 | 0.29 | 0.26 | 0.12 | 0.00 | 0.06 | 0.23 | 0.39 | 0.36 |
|
95 |
+
| naive T cell | 160 | 0.79 | 0.86 | 0.86 | 0.82 | 0.00 | 0.77 | 0.87 | 0.85 | 0.87 |
|
96 |
+
| kidney loop of Henle thick ascending limb epithelial cell | 162 | 0.91 | 0.93 | 0.67 | 0.76 | 0.00 | 0.46 | 0.92 | 0.92 | 0.96 |
|
97 |
+
| immature B cell | 126 | 0.76 | 0.73 | 0.65 | 0.73 | 0.00 | 0.68 | 0.52 | 0.60 | 0.80 |
|
98 |
+
| alveolar macrophage | 132 | 0.92 | 0.92 | 0.82 | 0.91 | 0.00 | 0.95 | 0.97 | 0.94 | 0.96 |
|
99 |
+
| endothelial cell of hepatic sinusoid | 134 | 0.97 | 0.96 | 0.95 | 0.72 | 0.00 | 0.83 | 0.97 | 0.96 | 0.98 |
|
100 |
+
| lung macrophage | 120 | 0.84 | 0.08 | 0.46 | 0.20 | 0.00 | 0.84 | 0.85 | 0.78 | 0.93 |
|
101 |
+
| non-classical monocyte | 140 | 0.59 | 0.69 | 0.58 | 0.58 | 0.00 | 0.71 | 0.80 | 0.74 | 0.77 |
|
102 |
+
| endocardial cell | 100 | 0.93 | 0.93 | 0.92 | 0.82 | 0.00 | 0.87 | 0.87 | 0.84 | 0.91 |
|
103 |
+
| double negative thymocyte | 92 | 0.62 | 0.00 | 0.26 | 0.13 | 0.00 | 0.37 | 0.69 | 0.73 | 0.75 |
|
104 |
+
| late pro-B cell | 91 | 0.71 | 0.74 | 0.46 | 0.63 | 0.00 | 0.49 | 0.54 | 0.79 | 0.83 |
|
105 |
+
| kidney collecting duct principal cell | 114 | 0.74 | 0.91 | 0.81 | 0.81 | 0.00 | 0.88 | 0.95 | 0.90 | 0.95 |
|
106 |
+
| basal epithelial cell of tracheobronchial tree | 87 | 0.91 | 0.73 | 0.84 | 0.70 | 0.00 | 0.57 | 0.89 | 0.82 | 0.95 |
|
107 |
+
| mesenchymal cell | 98 | 0.31 | 0.00 | 0.04 | 0.06 | 0.00 | 0.04 | 0.48 | 0.52 | 0.46 |
|
108 |
+
| pancreatic A cell | 84 | 0.66 | 0.72 | 0.56 | 0.77 | 0.00 | 0.85 | 0.87 | 0.86 | 0.85 |
|
109 |
+
| adventitial cell | 86 | 0.69 | 0.62 | 0.57 | 0.20 | 0.00 | 0.14 | 0.85 | 0.54 | 0.78 |
|
110 |
+
| epithelial cell | 83 | 0.41 | 0.12 | 0.58 | 0.52 | 0.00 | 0.20 | 0.52 | 0.63 | 0.67 |
|
111 |
+
| kidney distal convoluted tubule epithelial cell | 62 | 0.74 | 0.85 | 0.71 | 0.31 | 0.00 | 0.86 | 0.89 | 0.82 | 0.89 |
|
112 |
+
| neutrophil | 78 | 0.57 | 0.66 | 0.39 | 0.50 | 0.00 | 0.47 | 0.71 | 0.65 | 0.74 |
|
113 |
+
| pancreatic ductal cell | 72 | 0.92 | 0.76 | 0.83 | 0.86 | 0.00 | 0.88 | 0.94 | 0.88 | 0.92 |
|
114 |
+
| myeloid dendritic cell | 48 | 0.36 | 0.48 | 0.40 | 0.40 | 0.00 | 0.44 | 0.63 | 0.45 | 0.62 |
|
115 |
+
| astrocyte | 61 | 0.90 | 0.94 | 0.94 | 0.95 | 0.00 | 0.94 | 0.96 | 0.89 | 0.97 |
|
116 |
+
| secretory cell | 56 | 0.25 | 0.51 | 0.37 | 0.42 | 0.00 | 0.69 | 0.86 | 0.82 | 0.73 |
|
117 |
+
| myeloid leukocyte | 57 | 0.62 | 0.41 | 0.46 | 0.18 | 0.00 | 0.27 | 0.54 | 0.58 | 0.78 |
|
118 |
+
| plasmatocyte | 42 | 0.75 | 0.78 | 0.48 | 0.64 | 0.00 | 0.61 | 0.83 | 0.77 | 0.87 |
|
119 |
+
| neuron | 47 | 0.62 | 0.64 | 0.82 | 0.78 | 0.00 | 0.85 | 0.87 | 0.79 | 0.86 |
|
120 |
+
| brain pericyte | 41 | 0.44 | 0.79 | 0.57 | 0.70 | 0.00 | 0.82 | 0.93 | 0.87 | 0.83 |
|
121 |
+
| vein endothelial cell | 57 | 0.48 | 0.80 | 0.62 | 0.51 | 0.00 | 0.79 | 0.85 | 0.76 | 0.86 |
|
122 |
+
| pancreatic D cell | 39 | 0.00 | 0.56 | 0.48 | 0.86 | 0.00 | 0.88 | 0.91 | 0.93 | 0.91 |
|
123 |
+
| kidney collecting duct epithelial cell | 33 | 0.37 | 0.60 | 0.17 | 0.70 | 0.00 | 0.54 | 0.84 | 0.77 | 0.88 |
|
124 |
+
| aortic endothelial cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
|
125 |
+
| brush cell | 43 | 0.84 | 0.72 | 0.24 | 0.79 | 0.00 | 0.72 | 0.81 | 0.81 | 0.87 |
|
126 |
+
| erythroid progenitor cell, mammalian | 38 | 0.49 | 0.00 | 0.70 | 0.16 | 0.00 | 0.19 | 0.69 | 0.55 | 0.83 |
|
127 |
+
| regular atrial cardiac myocyte | 32 | 0.32 | 0.47 | 0.32 | 0.41 | 0.00 | 0.38 | 0.52 | 0.53 | 0.62 |
|
128 |
+
| kidney cortex artery cell | 42 | 0.77 | 0.85 | 0.65 | 0.26 | 0.00 | 0.32 | 0.71 | 0.61 | 0.82 |
|
129 |
+
| erythrocyte | 44 | 0.82 | 0.64 | 0.60 | 0.79 | 0.00 | 0.70 | 0.81 | 0.86 | 0.89 |
|
130 |
+
| mesangial cell | 38 | 0.00 | 0.79 | 0.45 | 0.22 | 0.00 | 0.30 | 0.78 | 0.63 | 0.80 |
|
131 |
+
| kidney loop of Henle ascending limb epithelial cell | 23 | 0.27 | 0.49 | 0.29 | 0.13 | 0.00 | 0.27 | 0.54 | 0.54 | 0.69 |
|
132 |
+
| cardiac muscle cell | 42 | 0.81 | 0.81 | 0.72 | 0.91 | 0.00 | 0.89 | 1.00 | 0.97 | 0.99 |
|
133 |
+
| mature alpha-beta T cell | 37 | 0.00 | 0.20 | 0.10 | 0.38 | 0.00 | 0.32 | 0.38 | 0.49 | 0.31 |
|
134 |
+
| basophil | 31 | 0.54 | 0.69 | 0.75 | 0.58 | 0.00 | 0.40 | 0.67 | 0.52 | 0.81 |
|
135 |
+
| cardiac valve cell | 24 | 0.63 | 0.71 | 0.48 | 0.68 | 0.00 | 0.70 | 0.82 | 0.73 | 0.77 |
|
136 |
+
| oligodendrocyte precursor cell | 38 | 0.97 | 0.97 | 0.96 | 0.97 | 0.00 | 0.96 | 0.99 | 0.99 | 0.99 |
|
137 |
+
| Schwann cell | 26 | 0.74 | 0.81 | 0.76 | 0.75 | 0.00 | 0.74 | 0.80 | 0.69 | 0.79 |
|
138 |
+
| pulmonary interstitial fibroblast | 23 | 0.92 | 0.85 | 0.81 | 0.82 | 0.00 | 0.81 | 0.90 | 0.94 | 0.96 |
|
139 |
+
| smooth muscle cell of trachea | 23 | 0.00 | 0.29 | 0.32 | 0.27 | 0.00 | 0.07 | 0.52 | 0.52 | 0.27 |
|
140 |
+
| granulocyte monocyte progenitor cell | 31 | 0.00 | 0.63 | 0.74 | 0.73 | 0.00 | 0.75 | 0.91 | 0.85 | 0.92 |
|
141 |
+
| interneuron | 22 | 0.51 | 0.59 | 0.45 | 0.68 | 0.00 | 0.76 | 0.89 | 0.75 | 0.81 |
|
142 |
+
| pancreatic PP cell | 27 | 0.00 | 0.14 | 0.20 | 0.59 | 0.00 | 0.73 | 0.75 | 0.81 | 0.58 |
|
143 |
+
| smooth muscle cell of the pulmonary artery | 20 | 0.00 | 0.62 | 0.57 | 0.40 | 0.00 | 0.33 | 0.83 | 0.77 | 0.76 |
|
144 |
+
| cell of skeletal muscle | 22 | 0.89 | 0.91 | 0.72 | 0.93 | 0.00 | 0.92 | 0.89 | 0.90 | 0.93 |
|
145 |
+
| brush cell of epithelium proper of large intestine | 15 | 0.49 | 0.70 | 0.22 | 0.81 | 0.00 | 0.67 | 0.91 | 0.88 | 0.83 |
|
146 |
+
| Langerhans cell | 22 | 0.91 | 0.86 | 0.53 | 0.66 | 0.00 | 0.48 | 0.79 | 0.83 | 0.93 |
|
147 |
+
| stem cell of epidermis | 13 | 0.00 | 0.00 | 0.42 | 0.47 | 0.00 | 0.44 | 0.59 | 0.42 | 0.76 |
|
148 |
+
| regulatory T cell | 15 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.16 | 0.17 | 0.12 | 0.00 |
|
149 |
+
| epithelial cell of thymus | 19 | 0.10 | 0.00 | 0.23 | 0.27 | 0.00 | 0.06 | 0.57 | 0.39 | 0.25 |
|
150 |
+
| enteroendocrine cell | 13 | 0.75 | 0.67 | 0.56 | 0.73 | 0.00 | 0.86 | 1.00 | 0.69 | 0.83 |
|
151 |
+
| kidney capillary endothelial cell | 16 | 0.24 | 0.45 | 0.48 | 0.07 | 0.00 | 0.34 | 0.26 | 0.28 | 0.34 |
|
152 |
+
| neuroepithelial stem cell | 21 | 0.25 | 0.31 | 0.58 | 0.52 | 0.00 | 0.33 | 0.87 | 0.58 | 0.70 |
|
153 |
+
| macrophage dendritic cell progenitor | 14 | 0.00 | 0.38 | 0.46 | 0.42 | 0.00 | 0.36 | 0.60 | 0.47 | 0.67 |
|
154 |
+
| DN3 thymocyte | 18 | 0.00 | 0.10 | 0.10 | 0.71 | 0.00 | 0.61 | 0.74 | 0.67 | 0.65 |
|
155 |
+
| regular ventricular cardiac myocyte | 6 | 0.27 | 0.00 | 0.36 | 0.40 | 0.00 | 0.71 | 0.62 | 0.57 | 0.67 |
|
156 |
+
| endothelial cell of lymphatic vessel | 6 | 0.00 | 0.40 | 0.91 | 0.17 | 0.00 | 0.16 | 0.44 | 0.35 | 0.62 |
|
157 |
+
| ciliated columnar cell of tracheobronchial tree | 8 | 0.00 | 0.76 | 0.80 | 0.89 | 0.00 | 0.40 | 1.00 | 0.93 | 1.00 |
|
158 |
+
| plasmacytoid dendritic cell | 10 | 0.00 | 0.18 | 0.50 | 0.00 | 0.00 | 0.13 | 0.55 | 0.36 | 0.67 |
|
159 |
+
| dendritic cell | 10 | 0.00 | 0.27 | 0.24 | 0.18 | 0.00 | 0.16 | 0.41 | 0.42 | 0.48 |
|
160 |
+
| medium spiny neuron | 12 | 0.00 | 0.59 | 0.80 | 0.70 | 0.00 | 0.92 | 1.00 | 0.92 | 0.96 |
|
161 |
+
| pericyte | 11 | 0.88 | 0.92 | 0.96 | 0.73 | 0.00 | 0.92 | 0.85 | 0.88 | 0.96 |
|
162 |
+
| neural stem cell | 12 | 0.29 | 0.50 | 0.70 | 0.91 | 0.00 | 0.72 | 1.00 | 0.96 | 0.96 |
|
163 |
+
| kidney proximal straight tubule epithelial cell | 9 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.20 | 0.26 | 0.00 |
|
164 |
+
| blood cell | 12 | 0.31 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.36 | 0.21 | 0.33 |
|
165 |
+
| immature NK T cell | 11 | 0.00 | 0.17 | 0.25 | 0.15 | 0.00 | 0.15 | 0.40 | 0.24 | 0.53 |
|
166 |
+
| cardiac neuron | 8 | 0.00 | 0.00 | 0.22 | 0.33 | 0.00 | 0.50 | 0.50 | 0.44 | 0.50 |
|
167 |
+
| mast cell | 10 | 0.00 | 0.00 | 0.40 | 0.27 | 0.00 | 0.00 | 0.56 | 0.69 | 0.50 |
|
168 |
+
| mucus secreting cell | 9 | 0.00 | 0.40 | 0.71 | 0.56 | 0.00 | 0.47 | 0.80 | 0.84 | 0.94 |
|
169 |
+
| early pro-B cell | 9 | 0.00 | 0.50 | 0.62 | 0.50 | 0.00 | 0.67 | 0.63 | 0.70 | 0.62 |
|
170 |
+
| pancreatic stellate cell | 12 | 0.80 | 0.40 | 0.50 | 0.53 | 0.00 | 0.13 | 0.56 | 0.88 | 0.86 |
|
171 |
+
| ependymal cell | 8 | 0.82 | 0.80 | 0.93 | 0.89 | 0.00 | 0.76 | 0.89 | 0.89 | 0.94 |
|
172 |
+
| Bergmann glial cell | 6 | 0.00 | 0.67 | 0.67 | 0.73 | 0.00 | 0.71 | 0.91 | 0.80 | 0.91 |
|
173 |
+
| neuroendocrine cell | 4 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.57 | 0.50 | 0.00 |
|
174 |
| fibrocyte | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
|
175 |
+
| hepatic stellate cell | 2 | 0.00 | 1.00 | 0.67 | 0.57 | 0.00 | 0.22 | 1.00 | 0.67 | 1.00 |
|
176 |
+
| club cell | 2 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
|
177 |
+
| respiratory basal cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
|
178 |
+
| kidney interstitial fibroblast | 2 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 | 0.15 | 0.40 | 0.40 | 1.00 |
|
179 |
+
| lymphoid lineage restricted progenitor cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
|
180 |
| lung neuroendocrine cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
|
181 |
| kidney cell | 0 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
|
182 |
+
| duct epithelial cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 | 0.00 |
|
183 |
|
184 |
The train accuracies are computed on the training data.
|
185 |
|
186 |
| Cell Type | N cells | celltypist | knn bbknn | knn harmony | knn on scvi | onclass | scanvi | svm | xgboost | Consensus Prediction |
|
187 |
| --- | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |
|
188 |
+
| B cell | 32688 | 0.85 | 0.90 | 0.89 | 0.93 | 0.00 | 0.93 | 0.73 | 0.79 | 0.95 |
|
189 |
+
| mesenchymal stem cell | 14492 | 0.86 | 0.86 | 0.92 | 0.89 | 0.00 | 0.91 | 0.91 | 0.85 | 0.95 |
|
190 |
+
| basal cell of epidermis | 14065 | 0.85 | 0.87 | 0.91 | 0.92 | 0.00 | 0.85 | 0.86 | 0.84 | 0.92 |
|
191 |
+
| granulocyte | 13911 | 0.80 | 0.84 | 0.90 | 0.91 | 0.00 | 0.86 | 0.74 | 0.85 | 0.91 |
|
192 |
+
| endothelial cell | 13412 | 0.86 | 0.86 | 0.87 | 0.86 | 0.00 | 0.86 | 0.90 | 0.86 | 0.95 |
|
193 |
+
| microglial cell | 11942 | 0.99 | 0.99 | 0.95 | 0.99 | 0.00 | 0.97 | 0.99 | 0.99 | 0.99 |
|
194 |
+
| T cell | 11498 | 0.77 | 0.79 | 0.77 | 0.84 | 0.00 | 0.89 | 0.68 | 0.75 | 0.88 |
|
195 |
+
| keratinocyte | 11126 | 0.86 | 0.87 | 0.91 | 0.93 | 0.00 | 0.88 | 0.89 | 0.86 | 0.92 |
|
196 |
+
| macrophage | 8645 | 0.45 | 0.63 | 0.83 | 0.77 | 0.00 | 0.74 | 0.56 | 0.60 | 0.82 |
|
197 |
+
| classical monocyte | 7327 | 0.83 | 0.54 | 0.78 | 0.90 | 0.00 | 0.89 | 0.82 | 0.84 | 0.93 |
|
198 |
+
| granulocytopoietic cell | 7276 | 0.65 | 0.79 | 0.85 | 0.86 | 0.00 | 0.76 | 0.70 | 0.81 | 0.88 |
|
199 |
+
| bladder urothelial cell | 5999 | 0.98 | 0.98 | 0.97 | 0.97 | 0.00 | 0.97 | 0.99 | 0.98 | 0.99 |
|
200 |
+
| mesenchymal stem cell of adipose tissue | 6012 | 0.81 | 0.81 | 0.84 | 0.76 | 0.00 | 0.94 | 0.90 | 0.81 | 0.93 |
|
201 |
+
| fibroblast of cardiac tissue | 5705 | 0.94 | 0.93 | 0.86 | 0.82 | 0.00 | 0.94 | 0.95 | 0.92 | 0.97 |
|
202 |
+
| endothelial cell of coronary artery | 5404 | 0.82 | 0.83 | 0.80 | 0.79 | 0.00 | 0.92 | 0.91 | 0.86 | 0.96 |
|
203 |
+
| skeletal muscle satellite cell | 4356 | 0.98 | 0.97 | 0.95 | 0.98 | 0.00 | 0.96 | 0.97 | 0.96 | 0.98 |
|
204 |
+
| proerythroblast | 4235 | 0.54 | 0.52 | 0.73 | 0.77 | 0.00 | 0.76 | 0.55 | 0.69 | 0.75 |
|
205 |
+
| kidney proximal convoluted tubule epithelial cell | 4024 | 0.84 | 0.81 | 0.89 | 0.89 | 0.00 | 0.87 | 0.90 | 0.89 | 0.92 |
|
206 |
+
| bronchial smooth muscle cell | 4024 | 0.94 | 0.96 | 0.82 | 0.90 | 0.00 | 0.93 | 0.96 | 0.95 | 0.97 |
|
207 |
+
| myeloid cell | 3977 | 0.51 | 0.56 | 0.73 | 0.70 | 0.00 | 0.85 | 0.72 | 0.72 | 0.86 |
|
208 |
+
| hepatocyte | 3690 | 0.99 | 0.98 | 0.98 | 0.98 | 0.00 | 0.97 | 0.99 | 0.99 | 0.99 |
|
209 |
+
| type B pancreatic cell | 3598 | 0.97 | 0.97 | 0.97 | 0.98 | 0.00 | 0.98 | 0.99 | 0.98 | 0.99 |
|
210 |
+
| bladder cell | 3627 | 0.97 | 0.95 | 0.98 | 0.81 | 0.00 | 0.96 | 0.99 | 0.94 | 0.99 |
|
211 |
+
| promonocyte | 3455 | 0.69 | 0.70 | 0.85 | 0.86 | 0.00 | 0.87 | 0.77 | 0.81 | 0.88 |
|
212 |
+
| DN4 thymocyte | 3418 | 0.35 | 0.46 | 0.60 | 0.68 | 0.00 | 0.88 | 0.63 | 0.69 | 0.78 |
|
213 |
+
| basal cell | 3366 | 0.98 | 0.97 | 0.98 | 0.97 | 0.00 | 0.97 | 0.99 | 0.97 | 0.99 |
|
214 |
+
| monocyte | 3281 | 0.66 | 0.53 | 0.77 | 0.81 | 0.00 | 0.86 | 0.80 | 0.81 | 0.90 |
|
215 |
+
| enterocyte of epithelium of large intestine | 3264 | 0.90 | 0.92 | 0.94 | 0.94 | 0.00 | 0.93 | 0.94 | 0.94 | 0.96 |
|
216 |
+
| thymocyte | 3145 | 0.74 | 0.75 | 0.86 | 0.93 | 0.00 | 0.91 | 0.91 | 0.92 | 0.96 |
|
217 |
+
| epithelial cell of proximal tubule | 3138 | 0.81 | 0.77 | 0.86 | 0.84 | 0.00 | 0.87 | 0.87 | 0.85 | 0.89 |
|
218 |
+
| natural killer cell | 3029 | 0.82 | 0.80 | 0.74 | 0.86 | 0.00 | 0.87 | 0.81 | 0.84 | 0.88 |
|
219 |
+
| naive B cell | 3015 | 0.44 | 0.20 | 0.89 | 0.66 | 0.00 | 0.76 | 0.52 | 0.56 | 0.83 |
|
220 |
+
| hematopoietic stem cell | 3000 | 0.92 | 0.93 | 0.94 | 0.94 | 0.00 | 0.92 | 0.95 | 0.94 | 0.96 |
|
221 |
+
| mature NK T cell | 2837 | 0.60 | 0.61 | 0.61 | 0.79 | 0.00 | 0.82 | 0.64 | 0.71 | 0.78 |
|
222 |
+
| fibroblast | 2836 | 0.46 | 0.26 | 0.69 | 0.66 | 0.00 | 0.70 | 0.67 | 0.65 | 0.79 |
|
223 |
+
| stromal cell | 2783 | 0.68 | 0.35 | 0.88 | 0.75 | 0.00 | 0.97 | 0.88 | 0.70 | 0.92 |
|
224 |
+
| keratinocyte stem cell | 2755 | 0.94 | 0.92 | 0.92 | 0.94 | 0.00 | 0.94 | 0.94 | 0.91 | 0.96 |
|
225 |
+
| erythroblast | 2652 | 0.65 | 0.69 | 0.83 | 0.84 | 0.00 | 0.83 | 0.72 | 0.77 | 0.85 |
|
226 |
+
| Kupffer cell | 2515 | 0.97 | 0.94 | 0.88 | 0.94 | 0.00 | 0.97 | 0.98 | 0.97 | 0.99 |
|
227 |
+
| megakaryocyte-erythroid progenitor cell | 2542 | 0.57 | 0.64 | 0.77 | 0.76 | 0.00 | 0.79 | 0.66 | 0.74 | 0.81 |
|
228 |
+
| pancreatic acinar cell | 2436 | 0.96 | 0.96 | 0.95 | 0.99 | 0.00 | 0.98 | 0.99 | 0.99 | 0.99 |
|
229 |
+
| luminal epithelial cell of mammary gland | 2410 | 0.92 | 0.91 | 0.98 | 0.93 | 0.00 | 0.97 | 0.97 | 0.94 | 0.98 |
|
230 |
+
| professional antigen presenting cell | 2381 | 0.06 | 0.01 | 0.30 | 0.53 | 0.00 | 0.92 | 0.39 | 0.42 | 0.56 |
|
231 |
+
| epidermal cell | 1978 | 0.84 | 0.86 | 0.89 | 0.89 | 0.00 | 0.82 | 0.88 | 0.85 | 0.91 |
|
232 |
+
| hematopoietic precursor cell | 1927 | 0.60 | 0.71 | 0.66 | 0.81 | 0.00 | 0.91 | 0.73 | 0.81 | 0.89 |
|
233 |
+
| oligodendrocyte | 1893 | 0.98 | 0.99 | 0.97 | 0.99 | 0.00 | 0.99 | 1.00 | 0.99 | 0.99 |
|
234 |
+
| fibroblast of lung | 1816 | 0.96 | 0.95 | 0.92 | 0.94 | 0.00 | 0.97 | 0.99 | 0.97 | 0.98 |
|
235 |
+
| CD8-positive, alpha-beta T cell | 1739 | 0.46 | 0.49 | 0.51 | 0.64 | 0.00 | 0.66 | 0.58 | 0.65 | 0.73 |
|
236 |
+
| epithelial cell of large intestine | 1719 | 0.78 | 0.78 | 0.85 | 0.83 | 0.00 | 0.84 | 0.88 | 0.87 | 0.89 |
|
237 |
+
| intestinal crypt stem cell | 1726 | 0.81 | 0.85 | 0.89 | 0.90 | 0.00 | 0.88 | 0.90 | 0.88 | 0.92 |
|
238 |
+
| chondrocyte | 1720 | 0.75 | 0.62 | 0.85 | 0.84 | 0.00 | 0.87 | 0.89 | 0.88 | 0.86 |
|
239 |
+
| immature T cell | 1597 | 0.71 | 0.00 | 0.83 | 0.94 | 0.00 | 0.93 | 0.87 | 0.90 | 0.96 |
|
240 |
+
| precursor B cell | 1601 | 0.71 | 0.86 | 0.93 | 0.89 | 0.00 | 0.89 | 0.84 | 0.89 | 0.93 |
|
241 |
+
| intermediate monocyte | 1568 | 0.19 | 0.04 | 0.48 | 0.67 | 0.00 | 0.68 | 0.58 | 0.60 | 0.75 |
|
242 |
+
| large intestine goblet cell | 1574 | 0.81 | 0.84 | 0.92 | 0.87 | 0.00 | 0.93 | 0.95 | 0.92 | 0.95 |
|
243 |
+
| CD4-positive, alpha-beta T cell | 1549 | 0.00 | 0.39 | 0.47 | 0.59 | 0.00 | 0.64 | 0.49 | 0.60 | 0.74 |
|
244 |
+
| smooth muscle cell | 1520 | 0.64 | 0.75 | 0.83 | 0.89 | 0.00 | 0.87 | 0.88 | 0.84 | 0.84 |
|
245 |
+
| leukocyte | 1491 | 0.48 | 0.49 | 0.70 | 0.66 | 0.00 | 0.79 | 0.61 | 0.70 | 0.91 |
|
246 |
+
| plasma cell | 1486 | 0.52 | 0.62 | 0.81 | 0.81 | 0.00 | 0.80 | 0.57 | 0.68 | 0.80 |
|
247 |
+
| lymphocyte | 1437 | 0.23 | 0.22 | 0.67 | 0.60 | 0.00 | 0.85 | 0.32 | 0.49 | 0.73 |
|
248 |
+
| naive T cell | 1408 | 0.79 | 0.86 | 0.93 | 0.92 | 0.00 | 0.81 | 0.90 | 0.88 | 0.90 |
|
249 |
+
| kidney loop of Henle thick ascending limb epithelial cell | 1392 | 0.90 | 0.91 | 0.93 | 0.85 | 0.00 | 0.92 | 0.96 | 0.96 | 0.96 |
|
250 |
+
| immature B cell | 1289 | 0.80 | 0.71 | 0.82 | 0.81 | 0.00 | 0.82 | 0.62 | 0.72 | 0.90 |
|
251 |
+
| alveolar macrophage | 1234 | 0.94 | 0.94 | 0.93 | 0.94 | 0.00 | 0.96 | 0.98 | 0.95 | 0.98 |
|
252 |
+
| endothelial cell of hepatic sinusoid | 1156 | 0.95 | 0.94 | 0.87 | 0.85 | 0.00 | 0.87 | 0.97 | 0.96 | 0.98 |
|
253 |
+
| lung macrophage | 1046 | 0.84 | 0.04 | 0.72 | 0.91 | 0.00 | 0.94 | 0.91 | 0.87 | 0.96 |
|
254 |
+
| non-classical monocyte | 1018 | 0.53 | 0.64 | 0.83 | 0.83 | 0.00 | 0.91 | 0.81 | 0.78 | 0.83 |
|
255 |
+
| endocardial cell | 953 | 0.92 | 0.92 | 0.94 | 0.87 | 0.00 | 0.92 | 0.92 | 0.85 | 0.96 |
|
256 |
+
| double negative thymocyte | 879 | 0.61 | 0.00 | 0.65 | 0.79 | 0.00 | 0.89 | 0.77 | 0.82 | 0.92 |
|
257 |
+
| late pro-B cell | 852 | 0.75 | 0.80 | 0.85 | 0.88 | 0.00 | 0.79 | 0.72 | 0.88 | 0.94 |
|
258 |
+
| kidney collecting duct principal cell | 826 | 0.73 | 0.89 | 0.91 | 0.88 | 0.00 | 0.89 | 0.97 | 0.96 | 0.97 |
|
259 |
+
| basal epithelial cell of tracheobronchial tree | 838 | 0.82 | 0.74 | 0.94 | 0.81 | 0.00 | 0.84 | 0.92 | 0.87 | 0.96 |
|
260 |
+
| mesenchymal cell | 781 | 0.23 | 0.00 | 0.41 | 0.30 | 0.00 | 0.44 | 0.56 | 0.56 | 0.55 |
|
261 |
+
| pancreatic A cell | 746 | 0.65 | 0.75 | 0.87 | 0.88 | 0.00 | 0.92 | 0.95 | 0.94 | 0.93 |
|
262 |
+
| adventitial cell | 725 | 0.66 | 0.59 | 0.86 | 0.54 | 0.00 | 0.70 | 0.84 | 0.65 | 0.92 |
|
263 |
+
| epithelial cell | 680 | 0.43 | 0.03 | 0.85 | 0.70 | 0.00 | 0.66 | 0.58 | 0.67 | 0.82 |
|
264 |
+
| kidney distal convoluted tubule epithelial cell | 682 | 0.82 | 0.88 | 0.88 | 0.74 | 0.00 | 0.95 | 0.97 | 0.96 | 0.96 |
|
265 |
+
| neutrophil | 626 | 0.51 | 0.50 | 0.76 | 0.83 | 0.00 | 0.76 | 0.73 | 0.67 | 0.88 |
|
266 |
+
| pancreatic ductal cell | 574 | 0.93 | 0.80 | 0.98 | 0.95 | 0.00 | 0.97 | 0.98 | 0.97 | 0.99 |
|
267 |
+
| myeloid dendritic cell | 570 | 0.47 | 0.53 | 0.87 | 0.65 | 0.00 | 0.86 | 0.75 | 0.62 | 0.80 |
|
268 |
+
| astrocyte | 531 | 0.91 | 0.93 | 0.97 | 0.95 | 0.00 | 0.97 | 1.00 | 0.99 | 0.99 |
|
269 |
+
| secretory cell | 507 | 0.26 | 0.35 | 0.82 | 0.69 | 0.00 | 0.90 | 0.93 | 0.88 | 0.93 |
|
270 |
+
| myeloid leukocyte | 458 | 0.57 | 0.33 | 0.86 | 0.55 | 0.00 | 0.69 | 0.63 | 0.71 | 0.94 |
|
271 |
+
| plasmatocyte | 454 | 0.81 | 0.78 | 0.91 | 0.82 | 0.00 | 0.82 | 0.89 | 0.88 | 0.95 |
|
272 |
+
| neuron | 437 | 0.61 | 0.57 | 0.86 | 0.81 | 0.00 | 0.78 | 0.95 | 0.91 | 0.93 |
|
273 |
+
| brain pericyte | 443 | 0.53 | 0.73 | 0.68 | 0.87 | 0.00 | 0.86 | 0.97 | 0.93 | 0.92 |
|
274 |
+
| vein endothelial cell | 414 | 0.48 | 0.77 | 0.80 | 0.70 | 0.00 | 0.78 | 0.86 | 0.80 | 0.93 |
|
275 |
+
| pancreatic D cell | 424 | 0.00 | 0.69 | 0.90 | 0.91 | 0.00 | 0.93 | 0.98 | 0.97 | 0.98 |
|
276 |
+
| kidney collecting duct epithelial cell | 425 | 0.39 | 0.51 | 0.84 | 0.86 | 0.00 | 0.95 | 0.91 | 0.87 | 0.94 |
|
277 |
+
| aortic endothelial cell | 421 | 0.16 | 0.00 | 0.27 | 0.43 | 0.00 | 0.70 | 0.38 | 0.32 | 0.74 |
|
278 |
+
| brush cell | 371 | 0.80 | 0.53 | 0.93 | 0.93 | 0.00 | 0.73 | 0.88 | 0.85 | 0.91 |
|
279 |
+
| erythroid progenitor cell, mammalian | 371 | 0.60 | 0.00 | 0.89 | 0.83 | 0.00 | 0.35 | 0.76 | 0.64 | 0.93 |
|
280 |
+
| regular atrial cardiac myocyte | 364 | 0.40 | 0.42 | 0.77 | 0.71 | 0.00 | 0.71 | 0.77 | 0.73 | 0.88 |
|
281 |
+
| kidney cortex artery cell | 339 | 0.78 | 0.83 | 0.75 | 0.50 | 0.00 | 0.40 | 0.75 | 0.71 | 0.79 |
|
282 |
+
| erythrocyte | 312 | 0.69 | 0.50 | 0.84 | 0.90 | 0.00 | 0.81 | 0.81 | 0.84 | 0.92 |
|
283 |
+
| mesangial cell | 316 | 0.00 | 0.64 | 0.67 | 0.74 | 0.00 | 0.69 | 0.84 | 0.77 | 0.94 |
|
284 |
+
| kidney loop of Henle ascending limb epithelial cell | 321 | 0.41 | 0.60 | 0.66 | 0.48 | 0.00 | 0.70 | 0.86 | 0.86 | 0.77 |
|
285 |
+
| cardiac muscle cell | 292 | 0.69 | 0.63 | 0.83 | 0.96 | 0.00 | 0.97 | 0.99 | 0.96 | 0.99 |
|
286 |
+
| mature alpha-beta T cell | 293 | 0.00 | 0.12 | 0.40 | 0.42 | 0.00 | 0.70 | 0.59 | 0.63 | 0.79 |
|
287 |
+
| basophil | 294 | 0.45 | 0.67 | 0.85 | 0.81 | 0.00 | 0.61 | 0.74 | 0.75 | 0.85 |
|
288 |
+
| cardiac valve cell | 291 | 0.73 | 0.82 | 0.75 | 0.87 | 0.00 | 0.85 | 0.93 | 0.89 | 0.91 |
|
289 |
+
| oligodendrocyte precursor cell | 274 | 0.95 | 0.97 | 0.97 | 0.98 | 0.00 | 0.98 | 0.99 | 1.00 | 1.00 |
|
290 |
+
| Schwann cell | 248 | 0.71 | 0.71 | 0.86 | 0.84 | 0.00 | 0.82 | 0.86 | 0.84 | 0.82 |
|
291 |
+
| pulmonary interstitial fibroblast | 248 | 0.94 | 0.85 | 0.91 | 0.89 | 0.00 | 0.94 | 0.91 | 0.96 | 0.96 |
|
292 |
+
| smooth muscle cell of trachea | 229 | 0.00 | 0.02 | 0.53 | 0.46 | 0.00 | 0.81 | 0.71 | 0.72 | 0.84 |
|
293 |
+
| granulocyte monocyte progenitor cell | 219 | 0.00 | 0.57 | 0.86 | 0.82 | 0.00 | 0.59 | 0.81 | 0.77 | 0.87 |
|
294 |
+
| interneuron | 218 | 0.52 | 0.56 | 0.81 | 0.74 | 0.00 | 0.78 | 0.97 | 0.91 | 0.91 |
|
295 |
+
| pancreatic PP cell | 201 | 0.00 | 0.05 | 0.72 | 0.78 | 0.00 | 0.85 | 0.92 | 0.93 | 0.93 |
|
296 |
+
| smooth muscle cell of the pulmonary artery | 189 | 0.00 | 0.70 | 0.79 | 0.42 | 0.00 | 0.48 | 0.87 | 0.78 | 0.88 |
|
297 |
+
| cell of skeletal muscle | 170 | 0.95 | 0.90 | 0.76 | 0.94 | 0.00 | 0.94 | 0.96 | 0.96 | 0.97 |
|
298 |
+
| brush cell of epithelium proper of large intestine | 160 | 0.66 | 0.70 | 0.85 | 0.87 | 0.00 | 0.83 | 0.97 | 0.94 | 0.92 |
|
299 |
+
| Langerhans cell | 153 | 0.91 | 0.78 | 0.91 | 0.77 | 0.00 | 0.68 | 0.90 | 0.78 | 0.96 |
|
300 |
+
| stem cell of epidermis | 158 | 0.00 | 0.00 | 0.74 | 0.79 | 0.00 | 0.37 | 0.60 | 0.61 | 0.89 |
|
301 |
+
| regulatory T cell | 155 | 0.00 | 0.06 | 0.20 | 0.22 | 0.00 | 0.44 | 0.52 | 0.35 | 0.77 |
|
302 |
+
| epithelial cell of thymus | 146 | 0.23 | 0.03 | 0.72 | 0.54 | 0.00 | 0.56 | 0.86 | 0.58 | 0.93 |
|
303 |
+
| enteroendocrine cell | 148 | 0.86 | 0.76 | 0.94 | 0.84 | 0.00 | 0.89 | 0.98 | 0.95 | 0.95 |
|
304 |
+
| kidney capillary endothelial cell | 145 | 0.24 | 0.50 | 0.38 | 0.32 | 0.00 | 0.31 | 0.31 | 0.32 | 0.30 |
|
305 |
+
| neuroepithelial stem cell | 130 | 0.17 | 0.08 | 0.87 | 0.69 | 0.00 | 0.54 | 0.93 | 0.69 | 0.82 |
|
306 |
+
| macrophage dendritic cell progenitor | 134 | 0.00 | 0.28 | 0.80 | 0.84 | 0.00 | 0.66 | 0.79 | 0.70 | 0.89 |
|
307 |
+
| DN3 thymocyte | 128 | 0.00 | 0.01 | 0.42 | 0.81 | 0.00 | 0.67 | 0.80 | 0.75 | 0.87 |
|
308 |
+
| regular ventricular cardiac myocyte | 135 | 0.46 | 0.04 | 0.89 | 0.79 | 0.00 | 0.91 | 0.95 | 0.99 | 0.97 |
|
309 |
+
| endothelial cell of lymphatic vessel | 133 | 0.00 | 0.43 | 0.94 | 0.66 | 0.00 | 0.31 | 0.64 | 0.48 | 0.89 |
|
310 |
+
| ciliated columnar cell of tracheobronchial tree | 119 | 0.00 | 0.82 | 0.76 | 0.93 | 0.00 | 0.67 | 0.96 | 0.94 | 0.97 |
|
311 |
+
| plasmacytoid dendritic cell | 112 | 0.00 | 0.23 | 0.87 | 0.67 | 0.00 | 0.44 | 0.72 | 0.70 | 0.90 |
|
312 |
+
| dendritic cell | 97 | 0.00 | 0.36 | 0.76 | 0.60 | 0.00 | 0.65 | 0.69 | 0.55 | 0.81 |
|
313 |
+
| medium spiny neuron | 91 | 0.00 | 0.12 | 0.93 | 0.87 | 0.00 | 0.94 | 1.00 | 0.99 | 0.99 |
|
314 |
+
| pericyte | 88 | 0.80 | 0.86 | 0.81 | 0.86 | 0.00 | 0.83 | 0.91 | 0.91 | 0.94 |
|
315 |
+
| neural stem cell | 85 | 0.46 | 0.53 | 0.88 | 0.92 | 0.00 | 0.79 | 0.96 | 0.94 | 0.96 |
|
316 |
+
| kidney proximal straight tubule epithelial cell | 86 | 0.00 | 0.00 | 0.09 | 0.00 | 0.00 | 0.25 | 0.60 | 0.45 | 0.41 |
|
317 |
+
| blood cell | 76 | 0.22 | 0.00 | 0.32 | 0.13 | 0.00 | 0.24 | 0.40 | 0.29 | 0.39 |
|
318 |
+
| immature NK T cell | 73 | 0.00 | 0.02 | 0.35 | 0.47 | 0.00 | 0.44 | 0.63 | 0.52 | 0.74 |
|
319 |
+
| cardiac neuron | 73 | 0.00 | 0.14 | 0.80 | 0.70 | 0.00 | 0.79 | 0.84 | 0.74 | 0.92 |
|
320 |
+
| mast cell | 66 | 0.00 | 0.00 | 0.62 | 0.87 | 0.00 | 0.73 | 0.63 | 0.67 | 0.85 |
|
321 |
+
| mucus secreting cell | 64 | 0.00 | 0.36 | 0.89 | 0.83 | 0.00 | 0.88 | 0.98 | 0.95 | 0.99 |
|
322 |
+
| early pro-B cell | 63 | 0.00 | 0.54 | 0.76 | 0.77 | 0.00 | 0.81 | 0.79 | 0.77 | 0.93 |
|
323 |
+
| pancreatic stellate cell | 57 | 0.81 | 0.69 | 0.90 | 0.57 | 0.00 | 0.22 | 0.54 | 0.85 | 0.94 |
|
324 |
+
| ependymal cell | 47 | 0.88 | 0.49 | 0.95 | 0.92 | 0.00 | 0.67 | 1.00 | 0.96 | 1.00 |
|
325 |
+
| Bergmann glial cell | 48 | 0.00 | 0.54 | 0.79 | 0.79 | 0.00 | 0.84 | 1.00 | 1.00 | 0.96 |
|
326 |
+
| neuroendocrine cell | 44 | 0.00 | 0.00 | 0.15 | 0.43 | 0.00 | 0.76 | 0.96 | 0.81 | 0.51 |
|
327 |
+
| fibrocyte | 39 | 0.00 | 0.00 | 0.43 | 0.36 | 0.00 | 0.22 | 0.73 | 0.57 | 0.77 |
|
328 |
+
| hepatic stellate cell | 37 | 0.00 | 0.10 | 0.82 | 0.85 | 0.00 | 0.36 | 0.96 | 0.86 | 0.99 |
|
329 |
+
| club cell | 35 | 0.13 | 0.41 | 0.27 | 0.16 | 0.00 | 0.19 | 0.23 | 0.22 | 0.17 |
|
330 |
+
| respiratory basal cell | 33 | 0.00 | 0.00 | 0.95 | 0.69 | 0.00 | 0.39 | 0.99 | 0.86 | 0.91 |
|
331 |
+
| kidney interstitial fibroblast | 14 | 0.00 | 0.00 | 0.78 | 0.90 | 0.00 | 0.36 | 0.38 | 0.78 | 0.93 |
|
332 |
+
| lymphoid lineage restricted progenitor cell | 13 | 0.96 | 0.00 | 0.87 | 0.78 | 0.00 | 0.25 | 0.09 | 0.96 | 0.96 |
|
333 |
+
| lung neuroendocrine cell | 8 | 0.00 | 0.00 | 1.00 | 0.67 | 0.00 | 0.59 | 0.62 | 1.00 | 1.00 |
|
334 |
+
| kidney cell | 3 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.32 | 0.11 | 0.75 | 0.50 |
|
335 |
+
| duct epithelial cell | 1 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.07 | 0.25 | 0.67 | 0.00 |
|
336 |
|
337 |
</details>
|
338 |
|