Common name
stringlengths 3
48
| Scientific name
stringlengths 9
32
| Taxon ID
int64 6.24k
2.72M
| Ensembl Assembly
stringlengths 2
37
| Accession
stringlengths 1
16
| Genebuild Method
stringclasses 5
values | Variation database
stringclasses 2
values | Regulation database
stringclasses 2
values |
|---|---|---|---|---|---|---|---|
Abingdon island giant tortoise | Chelonoidis abingdonii | 106,734 | ASM359739v1 | GCA_003597395.1 | Full genebuild | - | - |
African ostrich | Struthio camelus australis | 441,894 | ASM69896v1 | GCA_000698965.1 | Full genebuild | - | - |
Agassiz's desert tortoise | Gopherus agassizii | 38,772 | ASM289641v1 | GCA_002896415.1 | Full genebuild | - | - |
Algerian mouse | Mus spretus | 10,096 | SPRET_EiJ_v1 | GCA_001624865.1 | External annotation import | - | Y |
Alpaca | Vicugna pacos | 30,538 | vicPac1 | - | Projection build | - | - |
Alpine marmot | Marmota marmota marmota | 9,994 | marMar2.1 | GCA_001458135.1 | Full genebuild | - | - |
Amazon molly | Poecilia formosa | 48,698 | Poecilia_formosa-5.1.2 | GCA_000485575.1 | Full genebuild | - | - |
American beaver | Castor canadensis | 51,338 | C.can_genome_v1.0 | GCA_001984765.1 | Full genebuild | - | - |
American bison | Bison bison bison | 43,346 | Bison_UMD1.0 | GCA_000754665.1 | Full genebuild | Y | - |
American black bear | Ursus americanus | 9,643 | ASM334442v1 | GCA_003344425.1 | Full genebuild | - | - |
American mink | Neovison vison | 452,646 | NNQGG.v01 | GCA_900108605.1 | Full genebuild | Y | - |
Angola colobus | Colobus angolensis palliatus | 336,983 | Cang.pa_1.0 | GCA_000951035.1 | Full genebuild | - | Y |
Arabian camel | Camelus dromedarius | 9,838 | CamDro2 | GCA_000803125.2 | Full genebuild | - | - |
Arctic ground squirrel | Urocitellus parryii | 9,999 | ASM342692v1 | GCA_003426925.1 | Full genebuild | - | - |
Argentine black and white tegu | Salvator merianae | 96,440 | HLtupMer3 | GCA_003586115.1 | Full genebuild | - | - |
Armadillo | Dasypus novemcinctus | 9,361 | Dasnov3.0 | GCA_000208655.2 | Mixed strategy build | - | - |
Asian bonytongue | Scleropages formosus | 113,540 | fSclFor1.1 | GCA_900964775.1 | Full genebuild | - | - |
Asiatic black bear | Ursus thibetanus thibetanus | 441,215 | ASM966005v1 | GCA_009660055.1 | Full genebuild | - | - |
Atlantic cod | Gadus morhua | 8,049 | gadMor3.0 | GCA_902167405.1 | Full genebuild | - | - |
Atlantic cod - Celtic sea | Gadus morhua | 8,049 | gadMor_Celtic | GCA_010882105.1 | Full genebuild | - | - |
Atlantic herring | Clupea harengus | 7,950 | Ch_v2.0.2v2 | GCA_900700415.2 | Full genebuild | - | - |
Atlantic salmon | Salmo salar | 8,030 | Ssal_v3.1 | GCA_905237065.2 | Full genebuild | Y | Y |
Atlantic salmon - European origin ALTA | Salmo salar | 8,030 | Ssal_ALTA | GCA_931346935.2 | Full genebuild | - | - |
Atlantic salmon - North American Atlantic Salmon | Salmo salar | 8,030 | USDA_NASsal_1.1 | GCA_021399835.1 | Full genebuild | - | - |
Atlantic salmon - North American origin Brian | Salmo salar | 8,030 | Ssal_Brian_v1.0 | GCA_923944775.1 | Full genebuild | - | - |
Australian saltwater crocodile | Crocodylus porosus | 8,502 | CroPor_comp1 | GCA_001723895.1 | Full genebuild | - | - |
Ballan wrasse | Labrus bergylta | 56,723 | BallGen_V1 | GCA_900080235.1 | Full genebuild | - | - |
Barramundi perch | Lates calcarifer | 8,187 | ASB_HGAPassembly_v1 | GCA_900066035.1 | Full genebuild | - | - |
Beluga whale | Delphinapterus leucas | 9,749 | ASM228892v3 | GCA_002288925.3 | Full genebuild | - | - |
Bengalese finch | Lonchura striata domestica | 299,123 | LonStrDom1 | GCA_002197715.1 | Full genebuild | - | - |
Bicolor damselfish | Stegastes partitus | 144,197 | Stegastes_partitus-1.0.2 | GCA_000690725.1 | Full genebuild | - | - |
Black snub-nosed monkey | Rhinopithecus bieti | 61,621 | ASM169854v1 | GCA_001698545.1 | Full genebuild | - | Y |
Blind barbel | Sinocyclocheilus anshuiensis | 1,608,454 | SAMN03320099.WGS_v1.1 | GCA_001515605.1 | Full genebuild | - | - |
Blue tilapia | Oreochromis aureus | 47,969 | ZZ_aureus | GCA_013358895.1 | Full genebuild | - | - |
Blue tit | Cyanistes caeruleus | 156,563 | cyaCae2 | GCA_002901205.1 | Full genebuild | - | - |
Blue whale | Balaenoptera musculus | 9,771 | mBalMus1.v2 | GCA_009873245.2 | Full genebuild | - | - |
Blue-crowned manakin | Lepidothrix coronata | 321,398 | Lepidothrix_coronata-1.0 | GCA_001604755.1 | Full genebuild | - | - |
Blue-ringed sea krait | Laticauda laticaudata | 8,630 | latLat_1.0 | GCA_004320025.1 | Full genebuild | - | - |
Blunt-snouted clingfish | Gouania willdenowi | 441,366 | fGouWil2.1 | GCA_900634775.1 | Full genebuild | - | - |
Bolivian squirrel monkey | Saimiri boliviensis boliviensis | 39,432 | SaiBol1.0 | GCA_000235385.1 | Full genebuild | - | Y |
Bonobo | Pan paniscus | 9,597 | panpan1.1 | GCA_000258655.2 | Full genebuild | - | Y |
Brazilian guinea pig | Cavia aperea | 37,548 | CavAp1.0 | GCA_000688575.1 | Full genebuild | - | - |
Brown trout | Salmo trutta | 8,032 | fSalTru1.1 | GCA_901001165.1 | Full genebuild | - | - |
Budgerigar | Melopsittacus undulatus | 13,146 | bMelUnd1.mat.Z | GCA_012275295.1 | Full genebuild | - | - |
Burrowing owl | Athene cunicularia | 194,338 | athCun1 | GCA_003259725.1 | Full genebuild | - | - |
Burton's mouthbrooder | Haplochromis burtoni | 8,153 | AstBur1.0 | GCA_000239415.1 | Full genebuild | - | - |
Bushbaby | Otolemur garnettii | 30,611 | OtoGar3 | GCA_000181295.3 | Full genebuild | - | - |
C.intestinalis | Ciona intestinalis | 7,719 | KH | GCA_000224145.1 | Full genebuild | Y | Y |
C.savignyi | Ciona savignyi | 51,511 | CSAV 2.0 | - | Full genebuild | - | - |
Caenorhabditis elegans (Nematode, N2) | Caenorhabditis elegans | 6,239 | WBcel235 | GCA_000002985.3 | Import | - | Y |
California sea lion | Zalophus californianus | 9,704 | mZalCal1.pri | GCA_009762305.1 | Full genebuild | - | - |
Canada lynx | Lynx canadensis | 61,383 | mLynCan4_v1.p | GCA_007474595.1 | Full genebuild | - | - |
Cat | Felis catus | 9,685 | Felis_catus_9.0 | GCA_000181335.4 | Full genebuild | Y | Y |
Central bearded dragon | Pogona vitticeps | 103,695 | pvi1.1 | GCA_900067755.1 | Full genebuild | - | - |
Chacoan peccary | Catagonus wagneri | 51,154 | CatWag_v2_BIUU_UCD | GCA_004024745.2 | Full genebuild | - | - |
Channel bull blenny | Cottoperca gobio | 56,716 | fCotGob3.1 | GCA_900634415.1 | Full genebuild | - | - |
Channel catfish | Ictalurus punctatus | 7,998 | ASM400665v3 | GCA_004006655.3 | Full genebuild | - | Y |
Chicken | Gallus gallus | 9,031 | bGalGal1.mat.broiler.GRCg7b | GCA_016699485.1 | Full genebuild | Y | Y |
Chicken (Red Jungle fowl) | Gallus gallus | 9,031 | GRCg6a | GCA_000002315.5 | Full genebuild | Y | Y |
Chicken (paternal White leghorn layer) | Gallus gallus | 9,031 | bGalGal1.pat.whiteleghornlayer.GRCg7w | GCA_016700215.2 | Full genebuild | - | - |
Chilean tinamou | Nothoprocta perdicaria | 30,464 | notPer1 | GCA_003342845.1 | Full genebuild | - | - |
Chimpanzee | Pan troglodytes | 9,598 | Pan_tro_3.0 | GCA_000001515.5 | Full genebuild | Y | Y |
Chinese hamster CHOK1GS | Cricetulus griseus | 10,029 | CHOK1GS_HDv1 | GCA_900186095.1 | Full genebuild | - | Y |
Chinese hamster CriGri | Cricetulus griseus | 10,029 | CriGri_1.0 | GCA_000223135.1 | Full genebuild | - | Y |
Chinese hamster PICR | Cricetulus griseus | 10,029 | CriGri-PICRH-1.0 | GCA_003668045.2 | Full genebuild | - | - |
Chinese medaka | Oryzias sinensis | 183,150 | ASM858656v1 | GCA_008586565.1 | Full genebuild | - | - |
Chinese softshell turtle | Pelodiscus sinensis | 13,735 | PelSin_1.0 | GCA_000230535.1 | Mixed strategy build | - | - |
Chinook salmon | Oncorhynchus tshawytscha | 74,940 | Otsh_v2.0 | GCA_018296145.1 | Full genebuild | - | - |
Climbing perch | Anabas testudineus | 64,144 | fAnaTes1.3 | GCA_900324465.3 | Full genebuild | - | - |
Clown anemonefish | Amphiprion ocellaris | 80,972 | ASM2253959v1 | GCA_022539595.1 | Full genebuild | - | - |
Coelacanth | Latimeria chalumnae | 7,897 | LatCha1 | GCA_000225785.1 | Full genebuild | - | - |
Coho salmon | Oncorhynchus kisutch | 8,019 | Okis_V2 | GCA_002021735.2 | Full genebuild | - | - |
Collared flycatcher | Ficedula albicollis | 59,894 | FicAlb1.5 | GCA_000247815.2 | Full genebuild | Y | - |
Common canary | Serinus canaria | 9,135 | SCA1 | GCA_000534875.1 | Full genebuild | - | - |
Common carp | Cyprinus carpio carpio | 630,221 | Cypcar_WagV4.0 | GCA_905221575.1 | Full genebuild | - | Y |
Common carp german mirror | Cyprinus carpio | 7,962 | German_Mirror_carp_1.0 | GCA_004011555.1 | Full genebuild | - | - |
Common carp hebao red | Cyprinus carpio | 7,962 | Hebao_red_carp_1.0 | GCA_004011595.1 | Full genebuild | - | - |
Common carp huanghe | Cyprinus carpio | 7,962 | Hunaghe_carp_2.0 | GCA_004011575.1 | Full genebuild | - | - |
Common kestrel | Falco tinnunculus | 100,819 | FalTin1.0 | GCA_010332995.1 | Full genebuild | - | - |
Common snapping turtle | Chelydra serpentina | 8,475 | Chelydra_serpentina-1.0 | GCA_007922165.1 | Full genebuild | - | - |
Common wall lizard | Podarcis muralis | 64,176 | PodMur_1.0 | GCA_004329235.1 | Full genebuild | - | - |
Common wombat | Vombatus ursinus | 29,139 | bare-nosed_wombat_genome_assembly | GCA_900497805.2 | Full genebuild | - | - |
Coquerel's sifaka | Propithecus coquereli | 379,532 | Pcoq_1.0 | GCA_000956105.1 | Full genebuild | - | Y |
Cow | Bos taurus | 9,913 | ARS-UCD1.3 | GCA_002263795.3 | Full genebuild | Y | Y |
Crab-eating macaque | Macaca fascicularis | 9,541 | Macaca_fascicularis_6.0 | GCA_011100615.1 | Full genebuild | Y | - |
Damara mole rat | Fukomys damarensis | 885,580 | DMR_v1.0 | GCA_000743615.1 | Full genebuild | - | - |
Dark-eyed junco | Junco hyemalis | 40,217 | ASM382977v1 | GCA_003829775.1 | Full genebuild | - | - |
Daurian ground squirrel | Spermophilus dauricus | 99,837 | ASM240643v1 | GCA_002406435.1 | Full genebuild | - | - |
Degu | Octodon degus | 10,160 | OctDeg1.0 | GCA_000260255.1 | Full genebuild | - | - |
Denticle herring | Denticeps clupeoides | 299,321 | fDenClu1.2 | GCA_900700375.2 | Full genebuild | - | - |
Dingo | Canis lupus dingo | 286,419 | ASM325472v1 | GCA_003254725.1 | Full genebuild | - | - |
Dog | Canis lupus familiaris | 9,615 | ROS_Cfam_1.0 | GCA_014441545.1 | Full genebuild | Y | Y |
Dog - Basenji | Canis lupus familiaris | 9,615 | Basenji_breed-1.1 | GCA_004886185.1 | Full genebuild | - | Y |
Dog - Boxer | Canis lupus familiaris | 9,615 | Dog10K_Boxer_Tasha | GCA_000002285.4 | Full genebuild | Y | Y |
Dog - German Shepherd | Canis lupus familiaris | 9,615 | UU_Cfam_GSD_1.0 | GCA_011100685.1 | Full genebuild | - | - |
Dog - Great Dane | Canis lupus familiaris | 9,615 | UMICH_Zoey_3.1 | GCA_005444595.1 | Full genebuild | - | Y |
Dolphin | Tursiops truncatus | 9,739 | turTru1 | - | Projection build | - | - |
Domestic yak | Bos grunniens | 30,521 | LU_Bosgru_v3.0 | GCA_005887515.1 | Full genebuild | Y | - |
Donkey | Equus asinus | 9,793 | ASM1607732v2 | GCA_016077325.2 | Full genebuild | - | - |
Drill | Mandrillus leucophaeus | 9,568 | Mleu.le_1.0 | GCA_000951045.1 | Full genebuild | - | Y |
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